Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_015413.1
RNA-binding signal recognition particle subunit SRP54 [Saccharomyces cerevisiae S288C]
...
Query length:
541 aa
DOMAINS: and other(s) domains
...
Query: RNA-binding signal recognition particle subunit SRP54
...
RNA-binding signal recognition particle subunit SRP54 [Saccharomyces cerevisiae S288C]
541 aa protein
accession:NP_015413.1
signal recognition particle subunit Srp54
...
signal recognition particle subunit Srp54 [Schizosaccharomyces pombe]
522 aa protein
accession:NP_588209.1
signal recognition particle subunit SRP54
...
signal recognition particle subunit SRP54 [Danio rerio]
504 aa protein
accession:NP_957282.1
signal recognition particle subunit SRP54 isoform 1
...
signal recognition particle subunit SRP54 isoform 1 [Homo sapiens]
504 aa protein
accession:NP_003127.1
signal recognition particle 54C isoform 1
...
signal recognition particle 54C isoform 1 [Mus musculus]
504 aa protein
accession:NP_001093580.1
Signal recognition particle 54 kDa protein
...
Signal recognition particle 54 kDa protein [Caenorhabditis elegans]
496 aa protein
accession:NP_501507.1
DOMAINS: and other(s) domains
...
RNA-binding signal recognition particle subunit SRP54 [Saccharomyces cerevisiae S288C]
541 aa protein
accession:NP_015413.1
signal recognition particle subunit Srp54 [Schizosaccharomyces pombe]
522 aa protein
accession:NP_588209.1
signal recognition particle subunit SRP54 [Danio rerio]
504 aa protein
accession:NP_957282.1
signal recognition particle subunit SRP54 isoform 1 [Homo sapiens]
504 aa protein
accession:NP_003127.1
signal recognition particle 54C isoform 1 [Mus musculus]
504 aa protein
accession:NP_001093580.1
Signal recognition particle 54 kDa protein [Caenorhabditis elegans]
496 aa protein
accession:NP_501507.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
Select:AllNone
Selected:0
Alignments
Download
GenPept
Graphics
Distance tree of results
Multiple alignment
Show/hide columns of the table presenting best hits
Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 531 | 531 | 80% | 0.0 | 59.82% | NP_588209.1 | |
| 2 | 468 | 468 | 95% | 5e-160 | 48.47% | NP_001093580.1 | |
| 3 | 467 | 467 | 95% | 1e-159 | 48.28% | NP_003127.1 | |
| 4 | 456 | 456 | 95% | 5e-155 | 46.74% | NP_957282.1 | |
| 5 | 442 | 442 | 79% | 9e-150 | 50.93% | NP_501507.1 |