Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_015435.1
DNA-directed RNA polymerase core subunit RPC40 [Saccharomyces cerevisiae S288C]
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Query length:
335 aa
DOMAINS: and other(s) domains
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Query: DNA-directed RNA polymerase core subunit RPC40
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DNA-directed RNA polymerase core subunit RPC40 [Saccharomyces cerevisiae S288C]
335 aa protein
accession:NP_015435.1
DNA-directed RNA polymerase I and III subunit Rpc40
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DNA-directed RNA polymerase I and III subunit Rpc40 [Schizosaccharomyces pombe]
348 aa protein
accession:NP_596831.1
DNA-directed RNA polymerases I and III subunit RPAC1
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DNA-directed RNA polymerases I and III subunit RPAC1 [Danio rerio]
347 aa protein
accession:NP_956860.1
DNA-directed RNA polymerases I and III subunit RPAC1
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DNA-directed RNA polymerases I and III subunit RPAC1 [Rattus norvegicus]
346 aa protein
accession:NP_001008331.1
DNA-directed RNA polymerases I and III subunit RPAC1
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DNA-directed RNA polymerases I and III subunit RPAC1 [Mus musculus]
346 aa protein
accession:NP_033111.2
DNA-directed RNA polymerases I and III subunit RPAC1 isoform 1
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DNA-directed RNA polymerases I and III subunit RPAC1 isoform 1 [Homo sapiens]
346 aa protein
accession:NP_976035.1
DOMAINS: and other(s) domains
...
DNA-directed RNA polymerase core subunit RPC40 [Saccharomyces cerevisiae S288C]
335 aa protein
accession:NP_015435.1
DNA-directed RNA polymerase I and III subunit Rpc40 [Schizosaccharomyces pombe]
348 aa protein
accession:NP_596831.1
DNA-directed RNA polymerases I and III subunit RPAC1 [Danio rerio]
347 aa protein
accession:NP_956860.1
DNA-directed RNA polymerases I and III subunit RPAC1 [Rattus norvegicus]
346 aa protein
accession:NP_001008331.1
DNA-directed RNA polymerases I and III subunit RPAC1 [Mus musculus]
346 aa protein
accession:NP_033111.2
DNA-directed RNA polymerases I and III subunit RPAC1 isoform 1 [Homo sapiens]
346 aa protein
accession:NP_976035.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
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Alignments
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Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 388 | 388 | 97% | 5e-134 | 57.27% | NP_596831.1 | |
| 2 | 342 | 342 | 94% | 1e-115 | 51.74% | NP_956860.1 | |
| 3 | 322 | 322 | 93% | 4e-108 | 47.62% | NP_001008331.1 | |
| 4 | 319 | 319 | 93% | 8e-107 | 46.98% | NP_033111.2 | |
| 5 | 315 | 315 | 96% | 3e-105 | 46.15% | NP_976035.1 |