Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_015435.1
DNA-directed RNA polymerase core subunit RPC40 [Saccharomyces cerevisiae S288C]
...
Query length:
335 aa
DOMAINS: and other(s) domains
...
RNA polymerase I and III subunit C
...
RNA polymerase I and III subunit C [Drosophila melanogaster]
333 aa protein
accession:NP_608885.1
DNA-directed RNA polymerases I and III subunit RPAC1
...
DNA-directed RNA polymerases I and III subunit RPAC1 [Danio rerio]
347 aa protein
accession:NP_956860.1
DNA-directed RNA polymerases I and III subunit RPAC1
...
DNA-directed RNA polymerases I and III subunit RPAC1 [Mus musculus]
346 aa protein
accession:NP_033111.2
DNA-directed RNA polymerases I and III subunit RPAC1 isoform 1
...
DNA-directed RNA polymerases I and III subunit RPAC1 isoform 1 [Homo sapiens]
346 aa protein
accession:NP_976035.1
Query: DNA-directed RNA polymerase core subunit RPC40
...
DNA-directed RNA polymerase core subunit RPC40 [Saccharomyces cerevisiae S288C]
335 aa protein
accession:NP_015435.1
DNA-directed RNA polymerase I and III subunit Rpc40
...
DNA-directed RNA polymerase I and III subunit Rpc40 [Schizosaccharomyces pombe]
348 aa protein
accession:NP_596831.1
DOMAINS: and other(s) domains
...
RNA polymerase I and III subunit C [Drosophila melanogaster]
333 aa protein
accession:NP_608885.1
DNA-directed RNA polymerases I and III subunit RPAC1 [Danio rerio]
347 aa protein
accession:NP_956860.1
DNA-directed RNA polymerases I and III subunit RPAC1 [Mus musculus]
346 aa protein
accession:NP_033111.2
DNA-directed RNA polymerases I and III subunit RPAC1 isoform 1 [Homo sapiens]
346 aa protein
accession:NP_976035.1
DNA-directed RNA polymerase core subunit RPC40 [Saccharomyces cerevisiae S288C]
335 aa protein
accession:NP_015435.1
DNA-directed RNA polymerase I and III subunit Rpc40 [Schizosaccharomyces pombe]
348 aa protein
accession:NP_596831.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 388 | 388 | 97% | 5e-134 | 57.27% | NP_596831.1 | |
| 2 | 342 | 342 | 94% | 1e-115 | 51.74% | NP_956860.1 | |
| 3 | 319 | 319 | 93% | 8e-107 | 46.98% | NP_033111.2 | |
| 4 | 315 | 315 | 96% | 3e-105 | 46.15% | NP_976035.1 | |
| 5 | 287 | 287 | 90% | 1e-94 | 47.02% | NP_608885.1 |