Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_032231.1
histocompatibility 2, M region locus 9 isoform 2 precursor [Mus musculus]
...
Query length:
342 aa
DOMAINS: and other(s) domains
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HLA class I histocompatibility antigen, A alpha chain isoform X1
...
HLA class I histocompatibility antigen, A alpha chain isoform X1 [Homo sapiens]
362 aa protein
accession:XP_041536701.1
RT1 class I, locus M1, gene 2 isoform X1
...
RT1 class I, locus M1, gene 2 isoform X1 [Rattus norvegicus]
341 aa protein
accession:XP_063135469.1
RT1 class I, locus M1, gene 2 precursor
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RT1 class I, locus M1, gene 2 precursor [Rattus norvegicus]
335 aa protein
accession:NP_001008849.2
histocompatibility 2, M region locus 11 isoform X1
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histocompatibility 2, M region locus 11 isoform X1 [Mus musculus]
342 aa protein
accession:XP_036016438.1
Query: histocompatibility 2, M region locus 9 isoform 2 precursor
...
histocompatibility 2, M region locus 9 isoform 2 precursor [Mus musculus]
342 aa protein
accession:NP_032231.1
RT1 class I, M1, gene 5 isoform X1
...
RT1 class I, M1, gene 5 isoform X1 [Rattus norvegicus]
336 aa protein
accession:XP_063135573.1
DOMAINS: and other(s) domains
...
HLA class I histocompatibility antigen, A alpha chain isoform X1 [Homo sapiens]
362 aa protein
accession:XP_041536701.1
RT1 class I, locus M1, gene 2 isoform X1 [Rattus norvegicus]
341 aa protein
accession:XP_063135469.1
RT1 class I, locus M1, gene 2 precursor [Rattus norvegicus]
335 aa protein
accession:NP_001008849.2
histocompatibility 2, M region locus 11 isoform X1 [Mus musculus]
342 aa protein
accession:XP_036016438.1
histocompatibility 2, M region locus 9 isoform 2 precursor [Mus musculus]
342 aa protein
accession:NP_032231.1
RT1 class I, M1, gene 5 isoform X1 [Rattus norvegicus]
336 aa protein
accession:XP_063135573.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 412 | 412 | 98% | 8e-144 | 58.93% | XP_063135573.1 | |
| 2 | 381 | 381 | 99% | 1e-131 | 55.88% | XP_036016438.1 | |
| 3 | 326 | 326 | 97% | 7e-110 | 46.41% | XP_041536701.1 | |
| 4 | 404 | 404 | 94% | 2e-140 | 58.02% | XP_063135469.1 | |
| 5 | 401 | 401 | 92% | 1e-139 | 58.49% | NP_001008849.2 |