Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_034518.1
histocompatibility 2, class II, locus Mb2 precursor [Mus musculus]
...
Query length:
261 aa
DOMAINS: and other(s) domains
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rano class II histocompatibility antigen, A beta chain
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rano class II histocompatibility antigen, A beta chain [Danio rerio]
267 aa protein
accession:XP_021334248.2
uncharacterized protein LOC563286
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uncharacterized protein LOC563286 [Danio rerio]
277 aa protein
accession:NP_001074102.2
major histocompatibility complex class II DAB precursor
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major histocompatibility complex class II DAB precursor [Danio rerio]
250 aa protein
accession:NP_571551.3
HLA class II histocompatibility antigen, DM beta chain precursor
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HLA class II histocompatibility antigen, DM beta chain precursor [Homo sapiens]
263 aa protein
accession:NP_002109.2
Query: histocompatibility 2, class II, locus Mb2 precursor
...
histocompatibility 2, class II, locus Mb2 precursor [Mus musculus]
261 aa protein
accession:NP_034518.1
RT1 class II, DM beta isoform X1
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RT1 class II, DM beta isoform X1 [Rattus norvegicus]
279 aa protein
accession:XP_063135087.1
DOMAINS: and other(s) domains
...
rano class II histocompatibility antigen, A beta chain [Danio rerio]
267 aa protein
accession:XP_021334248.2
uncharacterized protein LOC563286 [Danio rerio]
277 aa protein
accession:NP_001074102.2
major histocompatibility complex class II DAB precursor [Danio rerio]
250 aa protein
accession:NP_571551.3
HLA class II histocompatibility antigen, DM beta chain precursor [Homo sapiens]
263 aa protein
accession:NP_002109.2
histocompatibility 2, class II, locus Mb2 precursor [Mus musculus]
261 aa protein
accession:NP_034518.1
RT1 class II, DM beta isoform X1 [Rattus norvegicus]
279 aa protein
accession:XP_063135087.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 458 | 458 | 94% | 2e-164 | 86.18% | XP_063135087.1 | |
| 2 | 395 | 395 | 94% | 7e-140 | 73.68% | NP_002109.2 | |
| 3 | 111 | 111 | 75% | 2e-28 | 33.33% | XP_021334248.2 | |
| 4 | 103 | 103 | 94% | 2e-25 | 24.71% | NP_001074102.2 | |
| 5 | 99.8 | 99.8 | 85% | 3e-24 | 26.55% | NP_571551.3 |