Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: NP_035315.1 proteasome subunit beta type-1 [Mus musculus] ... Query length: 240 aa

proteasome subunit beta type-1, putative ...

proteasome subunit beta type-1, putative [Plasmodium falciparum 3D7]

240 aa protein

accession:XP_002808699.1

Alignment Sequence Identical proteins

proteasome subunit beta type 1 ...

proteasome subunit beta type 1 [Dictyostelium discoideum AX4]

236 aa protein

accession:XP_001134620.1

Alignment Sequence Identical proteins

20S proteasome complex subunit beta 6 Pam1 ...

20S proteasome complex subunit beta 6 Pam1 [Schizosaccharomyces pombe]

225 aa protein

accession:NP_594729.1

Alignment Sequence Identical proteins

proteasome core particle subunit beta 6 ...

proteasome core particle subunit beta 6 [Saccharomyces cerevisiae S288C]

241 aa protein

accession:NP_009512.1

Alignment Sequence Identical proteins

Query: proteasome subunit beta type-1 ...

proteasome subunit beta type-1 [Mus musculus]

240 aa protein

accession:NP_035315.1

Sequence Identical proteins

proteasome subunit beta type-1 isoform X1 ...

proteasome subunit beta type-1 isoform X1 [Rattus norvegicus]

240 aa protein

accession:XP_063132072.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|XP_063132072.1\|	proteasome subunit beta type-1 isoform X1 [Rattus norvegicus]	486	486	100%	2e-176	97.92%	XP_063132072.1
2 Select seq ref\|NP_594729.1\|	20S proteasome complex subunit beta 6 Pam1 [Schizosaccharomyces pombe]	215	215	89%	1e-69	45.74%	NP_594729.1
3 Select seq ref\|NP_009512.1\|	proteasome core particle subunit beta 6 [Saccharomyces cerevisiae S288C]	207	207	91%	3e-66	44.21%	NP_009512.1
4 Select seq ref\|XP_001134620.1\|	proteasome subunit beta type 1 [Dictyostelium discoideum AX4]	191	191	88%	5e-60	42.79%	XP_001134620.1
5 Select seq ref\|XP_002808699.1\|	proteasome subunit beta type-1, putative [Plasmodium falciparum 3D7]	187	187	88%	2e-58	43.66%	XP_002808699.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments