Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_035562.1
U1 small nuclear ribonucleoprotein C isoform 1 [Mus musculus]
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Query length:
159 aa
DOMAINS: and other(s) domains
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C2H2-type zinc finger-containing protein
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C2H2-type zinc finger-containing protein [Dictyostelium discoideum AX4]
174 aa protein
accession:XP_642297.1
U1 small nuclear ribonucleoprotein C
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U1 small nuclear ribonucleoprotein C [Caenorhabditis elegans]
142 aa protein
accession:NP_001370586.1
U1 small nuclear ribonucleoprotein C isoform X2
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U1 small nuclear ribonucleoprotein C isoform X2 [Glycine max]
206 aa protein
accession:XP_040862222.1
U1 small nuclear ribonucleoprotein C isoform 2
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U1 small nuclear ribonucleoprotein C isoform 2 [Mus musculus]
182 aa protein
accession:NP_001400503.1
Query: U1 small nuclear ribonucleoprotein C isoform 1
...
U1 small nuclear ribonucleoprotein C isoform 1 [Mus musculus]
159 aa protein
accession:NP_035562.1
U1 small nuclear ribonucleoprotein C isoform X1
...
U1 small nuclear ribonucleoprotein C isoform X1 [Rattus norvegicus]
157 aa protein
accession:XP_063135287.1
DOMAINS: and other(s) domains
...
C2H2-type zinc finger-containing protein [Dictyostelium discoideum AX4]
174 aa protein
accession:XP_642297.1
U1 small nuclear ribonucleoprotein C [Caenorhabditis elegans]
142 aa protein
accession:NP_001370586.1
U1 small nuclear ribonucleoprotein C isoform X2 [Glycine max]
206 aa protein
accession:XP_040862222.1
U1 small nuclear ribonucleoprotein C isoform 2 [Mus musculus]
182 aa protein
accession:NP_001400503.1
U1 small nuclear ribonucleoprotein C isoform 1 [Mus musculus]
159 aa protein
accession:NP_035562.1
U1 small nuclear ribonucleoprotein C isoform X1 [Rattus norvegicus]
157 aa protein
accession:XP_063135287.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
Select:AllNone
Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 301 | 301 | 98% | 1e-105 | 100.00% | NP_001400503.1 | |
| 2 | 266 | 266 | 97% | 3e-92 | 91.61% | XP_063135287.1 | |
| 3 | 107 | 107 | 50% | 2e-29 | 60.49% | NP_001370586.1 | |
| 4 | 97.1 | 97.1 | 37% | 9e-25 | 63.64% | XP_040862222.1 | |
| 5 | 81.6 | 81.6 | 38% | 3e-19 | 54.10% | XP_642297.1 |