Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: NP_036711.1 histone H1t [Rattus norvegicus] ... Query length: 208 aa

uncharacterized protein LOC541350 ...

uncharacterized protein LOC541350 [Danio rerio]

201 aa protein

accession:NP_001013495.2

Alignment Sequence Identical proteins

histone H1.5 ...

histone H1.5 [Rattus norvegicus]

222 aa protein

accession:NP_001102887.1

Alignment Sequence Identical proteins

histone H1.5 ...

histone H1.5 [Mus musculus]

223 aa protein

accession:NP_064418.1

Alignment Sequence Identical proteins

histone H1t ...

histone H1t [Homo sapiens]

207 aa protein

accession:NP_005314.2

Alignment Sequence Identical proteins

Query: histone H1t ...

histone H1t [Rattus norvegicus]

208 aa protein

accession:NP_036711.1

Sequence Identical proteins

histone H1t ...

histone H1t [Mus musculus]

209 aa protein

accession:NP_034507.2

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_034507.2\|	histone H1t [Mus musculus]	311	311	100%	7e-108	92.82%	NP_034507.2
2 Select seq ref\|NP_005314.2\|	histone H1t [Homo sapiens]	189	189	100%	1e-59	62.74%	NP_005314.2
3 Select seq ref\|NP_001102887.1\|	histone H1.5 [Rattus norvegicus]	122	122	56%	3e-33	67.52%	NP_001102887.1
4 Select seq ref\|NP_001013495.2\|	uncharacterized protein LOC541350 [Danio rerio]	100	100	35%	3e-25	68.92%	NP_001013495.2
5 Select seq ref\|NP_064418.1\|	histone H1.5 [Mus musculus]	114	114	37%	2e-30	77.22%	NP_064418.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments