Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_038683.1
stromal cell-derived factor 1 isoform beta precursor [Mus musculus]
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Query length:
93 aa
DOMAINS: and other(s) domains
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chemokine (C-X-C motif) ligand 12b (stromal cell-derived factor 1) precursor
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chemokine (C-X-C motif) ligand 12b (stromal cell-derived factor 1) precursor [Danio rerio]
97 aa protein
accession:NP_001307343.1
stromal cell-derived factor 1 isoform beta precursor
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stromal cell-derived factor 1 isoform beta precursor [Rattus norvegicus]
93 aa protein
accession:NP_001029054.1
stromal cell-derived factor 1 isoform beta precursor
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stromal cell-derived factor 1 isoform beta precursor [Homo sapiens]
93 aa protein
accession:NP_000600.1
Query: stromal cell-derived factor 1 isoform beta precursor
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stromal cell-derived factor 1 isoform beta precursor [Mus musculus]
93 aa protein
accession:NP_038683.1
stromal cell-derived factor 1 isoform gamma precursor
...
stromal cell-derived factor 1 isoform gamma precursor [Mus musculus]
119 aa protein
accession:NP_001012495.1
stromal cell-derived factor 1 isoform alpha precursor
...
stromal cell-derived factor 1 isoform alpha precursor [Mus musculus]
89 aa protein
accession:NP_068350.1
DOMAINS: and other(s) domains
...
chemokine (C-X-C motif) ligand 12b (stromal cell-derived factor 1) precursor [Danio rerio]
97 aa protein
accession:NP_001307343.1
stromal cell-derived factor 1 isoform beta precursor [Rattus norvegicus]
93 aa protein
accession:NP_001029054.1
stromal cell-derived factor 1 isoform beta precursor [Homo sapiens]
93 aa protein
accession:NP_000600.1
stromal cell-derived factor 1 isoform beta precursor [Mus musculus]
93 aa protein
accession:NP_038683.1
stromal cell-derived factor 1 isoform gamma precursor [Mus musculus]
119 aa protein
accession:NP_001012495.1
stromal cell-derived factor 1 isoform alpha precursor [Mus musculus]
89 aa protein
accession:NP_068350.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 185 | 185 | 100% | 1e-61 | 96.77% | NP_001029054.1 | |
| 2 | 184 | 184 | 95% | 8e-61 | 100.00% | NP_001012495.1 | |
| 3 | 166 | 166 | 100% | 6e-54 | 92.47% | NP_000600.1 | |
| 4 | 91.3 | 91.3 | 95% | 2e-24 | 48.35% | NP_001307343.1 | |
| 5 | 181 | 181 | 95% | 4e-60 | 100.00% | NP_068350.1 |