Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: NP_054880.2 large ribosomal subunit protein uL18m isoform 1 [Homo sapiens] ... Query length: 180 aa

large ribosomal subunit protein uL18m isoform X1 ...

large ribosomal subunit protein uL18m isoform X1 [Danio rerio]

190 aa protein

accession:XP_005157378.1

Alignment Sequence Identical proteins

mitochondrial ribosomal protein L18 ...

mitochondrial ribosomal protein L18 [Drosophila melanogaster]

186 aa protein

accession:NP_610818.1

Alignment Sequence Identical proteins

Large ribosomal subunit protein uL18m ...

Large ribosomal subunit protein uL18m [Caenorhabditis elegans]

170 aa protein

accession:NP_498778.1

Alignment Sequence Identical proteins

large ribosomal subunit protein uL18m ...

large ribosomal subunit protein uL18m [Mus musculus]

180 aa protein

accession:NP_080586.1

Alignment Sequence Identical proteins

Query: large ribosomal subunit protein uL18m isoform 1 ...

large ribosomal subunit protein uL18m isoform 1 [Homo sapiens]

180 aa protein

accession:NP_054880.2

Sequence Identical proteins

large ribosomal subunit protein uL18m isoform 2 ...

large ribosomal subunit protein uL18m isoform 2 [Homo sapiens]

129 aa protein

accession:NP_001305746.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_080586.1\|	large ribosomal subunit protein uL18m [Mus musculus]	310	310	100%	2e-108	83.33%	NP_080586.1
2 Select seq ref\|NP_001305746.1\|	large ribosomal subunit protein uL18m isoform 2 [Homo sapiens]	224	224	63%	5e-75	95.65%	NP_001305746.1
3 Select seq ref\|XP_005157378.1\|	large ribosomal subunit protein uL18m isoform X1 [Danio rerio]	142	142	84%	6e-42	47.71%	XP_005157378.1
4 Select seq ref\|NP_610818.1\|	mitochondrial ribosomal protein L18 [Drosophila melanogaster]	100	100	71%	7e-26	41.54%	NP_610818.1
5 Select seq ref\|NP_498778.1\|	Large ribosomal subunit protein uL18m [Caenorhabditis elegans]	79.0	79.0	72%	2e-17	37.50%	NP_498778.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments