Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_054907.1
RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [Homo sapiens]
...
Query length:
194 aa
DOMAINS: and other(s) domains
...
Ssu72 CTD phosphatase, isoform C
...
Ssu72 CTD phosphatase, isoform C [Drosophila melanogaster]
195 aa protein
accession:NP_001285455.1
RNA polymerase II subunit A C-terminal domain phosphatase SSU72
...
RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [Danio rerio]
194 aa protein
accession:NP_957022.1
RNA polymerase II subunit A C-terminal domain phosphatase SSU72 like protein 3
...
RNA polymerase II subunit A C-terminal domain phosphatase SSU72 like protein 3 [Homo sapiens]
194 aa protein
accession:NP_001400929.1
RNA polymerase II subunit A C-terminal domain phosphatase SSU72
...
RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [Mus musculus]
194 aa protein
accession:NP_081175.2
Query: RNA polymerase II subunit A C-terminal domain phosphatase SSU72
...
RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [Homo sapiens]
194 aa protein
accession:NP_054907.1
RNA polymerase II subunit A C-terminal domain phosphatase SSU72
...
RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [Rattus norvegicus]
194 aa protein
accession:NP_001020828.1
DOMAINS: and other(s) domains
...
Ssu72 CTD phosphatase, isoform C [Drosophila melanogaster]
195 aa protein
accession:NP_001285455.1
RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [Danio rerio]
194 aa protein
accession:NP_957022.1
RNA polymerase II subunit A C-terminal domain phosphatase SSU72 like protein 3 [Homo sapiens]
194 aa protein
accession:NP_001400929.1
RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [Mus musculus]
194 aa protein
accession:NP_081175.2
RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [Homo sapiens]
194 aa protein
accession:NP_054907.1
RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [Rattus norvegicus]
194 aa protein
accession:NP_001020828.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
Select:AllNone
Selected:0
Alignments
Download
GenPept
Graphics
Distance tree of results
Multiple alignment
Show/hide columns of the table presenting best hits
Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 404 | 404 | 100% | 5e-145 | 99.48% | NP_001020828.1 | |
| 2 | 402 | 402 | 100% | 2e-144 | 98.97% | NP_081175.2 | |
| 3 | 370 | 370 | 100% | 2e-131 | 89.18% | NP_957022.1 | |
| 4 | 286 | 286 | 100% | 1e-98 | 71.65% | NP_001400929.1 | |
| 5 | 249 | 249 | 98% | 1e-83 | 61.26% | NP_001285455.1 |