Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: NP_057494.3 charged multivesicular body protein 5 isoform 1 [Homo sapiens] ... Query length: 219 aa

Charged multivesicular body protein 5 ...

Charged multivesicular body protein 5 [Caenorhabditis elegans]

217 aa protein

accession:NP_505219.1

Alignment Sequence Identical proteins

vacuolar protein sorting 60, isoform B ...

vacuolar protein sorting 60, isoform B [Drosophila melanogaster]

226 aa protein

accession:NP_001261994.1

Alignment Sequence Identical proteins

charged multivesicular body protein 5 ...

charged multivesicular body protein 5 [Danio rerio]

220 aa protein

accession:NP_956674.1

Alignment Sequence Identical proteins

charged multivesicular body protein 5 isoform 2 ...

charged multivesicular body protein 5 isoform 2 [Homo sapiens]

171 aa protein

accession:NP_001182465.1

Alignment Sequence Identical proteins

Query: charged multivesicular body protein 5 isoform 1 ...

charged multivesicular body protein 5 isoform 1 [Homo sapiens]

219 aa protein

accession:NP_057494.3

Sequence Identical proteins

charged multivesicular body protein 5 ...

charged multivesicular body protein 5 [Mus musculus]

219 aa protein

accession:NP_084090.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_084090.1\|	charged multivesicular body protein 5 [Mus musculus]	435	435	100%	2e-156	98.63%	NP_084090.1
2 Select seq ref\|NP_956674.1\|	charged multivesicular body protein 5 [Danio rerio]	358	358	100%	3e-126	84.55%	NP_956674.1
3 Select seq ref\|NP_001182465.1\|	charged multivesicular body protein 5 isoform 2 [Homo sapiens]	333	333	78%	6e-117	97.08%	NP_001182465.1
4 Select seq ref\|NP_001261994.1\|	vacuolar protein sorting 60, isoform B [Drosophila melanogaster]	281	281	100%	8e-96	63.06%	NP_001261994.1
5 Select seq ref\|NP_505219.1\|	Charged multivesicular body protein 5 [Caenorhabditis elegans]	265	265	99%	2e-89	60.27%	NP_505219.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments