Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_060422.4
small ribosomal subunit protein mS39 precursor [Homo sapiens]
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Query length:
689 aa
DOMAINS: and other(s) domains
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Pentatricopeptide repeat (PPR) superfamily protein
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Pentatricopeptide repeat (PPR) superfamily protein [Arabidopsis thaliana]
614 aa protein
accession:NP_001321279.1
Tetratricopeptide repeat (TPR)-like superfamily protein
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Tetratricopeptide repeat (TPR)-like superfamily protein [Arabidopsis thaliana]
630 aa protein
accession:NP_001323319.1
pentatricopeptide repeat-containing protein At1g12300, mitochondrial-like
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pentatricopeptide repeat-containing protein At1g12300, mitochondrial-like [Glycine max]
583 aa protein
accession:XP_025981984.1
small ribosomal subunit protein mS39 precursor
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small ribosomal subunit protein mS39 precursor [Danio rerio]
667 aa protein
accession:NP_001032449.2
Query: small ribosomal subunit protein mS39 precursor
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small ribosomal subunit protein mS39 precursor [Homo sapiens]
689 aa protein
accession:NP_060422.4
small ribosomal subunit protein mS39 isoform X3
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small ribosomal subunit protein mS39 isoform X3 [Rattus norvegicus]
615 aa protein
accession:XP_063142588.1
DOMAINS: and other(s) domains
...
Pentatricopeptide repeat (PPR) superfamily protein [Arabidopsis thaliana]
614 aa protein
accession:NP_001321279.1
Tetratricopeptide repeat (TPR)-like superfamily protein [Arabidopsis thaliana]
630 aa protein
accession:NP_001323319.1
pentatricopeptide repeat-containing protein At1g12300, mitochondrial-like [Glycine max]
583 aa protein
accession:XP_025981984.1
small ribosomal subunit protein mS39 precursor [Danio rerio]
667 aa protein
accession:NP_001032449.2
small ribosomal subunit protein mS39 precursor [Homo sapiens]
689 aa protein
accession:NP_060422.4
small ribosomal subunit protein mS39 isoform X3 [Rattus norvegicus]
615 aa protein
accession:XP_063142588.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
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Alignments
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Distance tree of results
Multiple alignment
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Available columns
Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
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1 | 906 | 906 | 85% | 0.0 | 75.29% | XP_063142588.1 | |
2 | 661 | 661 | 90% | 0.0 | 51.90% | NP_001032449.2 | |
3 | 67.0 | 67.0 | 17% | 2e-10 | 32.80% | NP_001321279.1 | |
4 | 61.2 | 61.2 | 52% | 1e-08 | 20.35% | XP_025981984.1 | |
5 | 56.2 | 56.2 | 17% | 4e-07 | 29.75% | NP_001323319.1 |