Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_060780.2
transcription factor IIIB 50 kDa subunit [Homo sapiens]
...
Query length:
419 aa
DOMAINS: and other(s) domains
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transcription initiation factor IIB
...
transcription initiation factor IIB [Methanothermobacter thermautotrophicus]
310 aa protein
accession:WP_010876518.1
transcription factor IIIB 50 kDa subunit isoform X1
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transcription factor IIIB 50 kDa subunit isoform X1 [Danio rerio]
423 aa protein
accession:XP_009303924.1
transcription factor IIIB 50 kDa subunit-like
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transcription factor IIIB 50 kDa subunit-like [Danio rerio]
253 aa protein
accession:XP_003201813.2
Query: transcription factor IIIB 50 kDa subunit
...
transcription factor IIIB 50 kDa subunit [Homo sapiens]
419 aa protein
accession:NP_060780.2
transcription factor IIIB 50 kDa subunit isoform X1
...
transcription factor IIIB 50 kDa subunit isoform X1 [Rattus norvegicus]
416 aa protein
accession:XP_063131511.1
transcription factor IIIB 50 kDa subunit isoform X1
...
transcription factor IIIB 50 kDa subunit isoform X1 [Mus musculus]
286 aa protein
accession:XP_036010133.1
DOMAINS: and other(s) domains
...
transcription initiation factor IIB [Methanothermobacter thermautotrophicus]
310 aa protein
accession:WP_010876518.1
transcription factor IIIB 50 kDa subunit isoform X1 [Danio rerio]
423 aa protein
accession:XP_009303924.1
transcription factor IIIB 50 kDa subunit-like [Danio rerio]
253 aa protein
accession:XP_003201813.2
transcription factor IIIB 50 kDa subunit [Homo sapiens]
419 aa protein
accession:NP_060780.2
transcription factor IIIB 50 kDa subunit isoform X1 [Rattus norvegicus]
416 aa protein
accession:XP_063131511.1
transcription factor IIIB 50 kDa subunit isoform X1 [Mus musculus]
286 aa protein
accession:XP_036010133.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
Select:AllNone
Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 723 | 723 | 100% | 0.0 | 85.20% | XP_063131511.1 | |
| 2 | 451 | 451 | 68% | 6e-159 | 78.67% | XP_036010133.1 | |
| 3 | 271 | 271 | 95% | 2e-86 | 36.13% | XP_009303924.1 | |
| 4 | 56.2 | 56.2 | 54% | 8e-08 | 21.74% | WP_010876518.1 | |
| 5 | 125 | 125 | 54% | 2e-32 | 34.25% | XP_003201813.2 |