Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_071544.1
transcription initiation factor IIA subunit 1 [Rattus norvegicus]
...
Query length:
377 aa
DOMAINS: and other(s) domains
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transcription factor IIA L, isoform C
...
transcription factor IIA L, isoform C [Drosophila melanogaster]
324 aa protein
accession:NP_733208.1
Prion-like-(Q/N-rich)-domain-bearing protein
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Prion-like-(Q/N-rich)-domain-bearing protein [Caenorhabditis elegans]
354 aa protein
accession:NP_001379665.1
transcription initiation factor IIA subunit 1
...
transcription initiation factor IIA subunit 1 [Danio rerio]
369 aa protein
accession:NP_997822.1
transcription initiation factor IIA subunit 1 isoform 1
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transcription initiation factor IIA subunit 1 isoform 1 [Homo sapiens]
376 aa protein
accession:NP_056943.1
Query: transcription initiation factor IIA subunit 1
...
transcription initiation factor IIA subunit 1 [Rattus norvegicus]
377 aa protein
accession:NP_071544.1
transcription initiation factor IIA subunit 1 isoform 1
...
transcription initiation factor IIA subunit 1 isoform 1 [Mus musculus]
378 aa protein
accession:NP_113568.2
DOMAINS: and other(s) domains
...
transcription factor IIA L, isoform C [Drosophila melanogaster]
324 aa protein
accession:NP_733208.1
Prion-like-(Q/N-rich)-domain-bearing protein [Caenorhabditis elegans]
354 aa protein
accession:NP_001379665.1
transcription initiation factor IIA subunit 1 [Danio rerio]
369 aa protein
accession:NP_997822.1
transcription initiation factor IIA subunit 1 isoform 1 [Homo sapiens]
376 aa protein
accession:NP_056943.1
transcription initiation factor IIA subunit 1 [Rattus norvegicus]
377 aa protein
accession:NP_071544.1
transcription initiation factor IIA subunit 1 isoform 1 [Mus musculus]
378 aa protein
accession:NP_113568.2
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 739 | 739 | 100% | 0.0 | 98.41% | NP_056943.1 | |
| 2 | 738 | 738 | 100% | 0.0 | 98.15% | NP_113568.2 | |
| 3 | 353 | 353 | 100% | 2e-119 | 64.82% | NP_997822.1 | |
| 4 | 121 | 121 | 16% | 3e-30 | 73.44% | NP_733208.1 | |
| 5 | 81.6 | 81.6 | 20% | 9e-16 | 54.22% | NP_001379665.1 |