Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_077021.1
TATA box-binding protein-associated factor RNA polymerase I subunit D [Homo sapiens]
...
Query length:
278 aa
DOMAINS: and other(s) domains
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Query: TATA box-binding protein-associated factor RNA polymerase I subunit D
...
TATA box-binding protein-associated factor RNA polymerase I subunit D [Homo sapiens]
278 aa protein
accession:NP_077021.1
TATA box-binding protein-associated factor RNA polymerase I subunit D isoform X2
...
TATA box-binding protein-associated factor RNA polymerase I subunit D isoform X2 [Rattus norvegicus]
285 aa protein
accession:XP_063121756.1
TATA box-binding protein-associated factor RNA polymerase I subunit D isoform X1
...
TATA box-binding protein-associated factor RNA polymerase I subunit D isoform X1 [Rattus norvegicus]
295 aa protein
accession:XP_063121754.1
TATA box-binding protein-associated factor RNA polymerase I subunit D isoform X2
...
TATA box-binding protein-associated factor RNA polymerase I subunit D isoform X2 [Mus musculus]
322 aa protein
accession:XP_036011262.1
TATA box-binding protein-associated factor RNA polymerase I subunit D isoform X1
...
TATA box-binding protein-associated factor RNA polymerase I subunit D isoform X1 [Mus musculus]
360 aa protein
accession:XP_036011259.1
DOMAINS: and other(s) domains
...
TATA box-binding protein-associated factor RNA polymerase I subunit D [Homo sapiens]
278 aa protein
accession:NP_077021.1
TATA box-binding protein-associated factor RNA polymerase I subunit D isoform X2 [Rattus norvegicus]
285 aa protein
accession:XP_063121756.1
TATA box-binding protein-associated factor RNA polymerase I subunit D isoform X1 [Rattus norvegicus]
295 aa protein
accession:XP_063121754.1
TATA box-binding protein-associated factor RNA polymerase I subunit D isoform X2 [Mus musculus]
322 aa protein
accession:XP_036011262.1
TATA box-binding protein-associated factor RNA polymerase I subunit D isoform X1 [Mus musculus]
360 aa protein
accession:XP_036011259.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
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Alignments
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Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 239 | 239 | 98% | 2e-77 | 57.91% | XP_063121756.1 | |
| 2 | 237 | 237 | 99% | 2e-76 | 55.48% | XP_036011262.1 | |
| 3 | 238 | 238 | 98% | 4e-77 | 57.91% | XP_063121754.1 | |
| 4 | 237 | 237 | 99% | 9e-76 | 55.83% | XP_036011259.1 |