Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_079921.2
U5 small nuclear ribonucleoprotein 40 kDa protein [Mus musculus]
...
Query length:
358 aa
DOMAINS: and other(s) domains
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uncharacterized protein Dmel_CG3436, isoform C
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uncharacterized protein Dmel_CG3436, isoform C [Drosophila melanogaster]
347 aa protein
accession:NP_001285543.1
Transducin/WD40 repeat-like superfamily protein
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Transducin/WD40 repeat-like superfamily protein [Arabidopsis thaliana]
343 aa protein
accession:NP_181905.1
U5 small nuclear ribonucleoprotein 40 kDa protein-like
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U5 small nuclear ribonucleoprotein 40 kDa protein-like [Glycine max]
345 aa protein
accession:XP_040868426.1
U5 small nuclear ribonucleoprotein 40 kDa protein
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U5 small nuclear ribonucleoprotein 40 kDa protein [Danio rerio]
347 aa protein
accession:NP_956616.1
Query: U5 small nuclear ribonucleoprotein 40 kDa protein
...
U5 small nuclear ribonucleoprotein 40 kDa protein [Mus musculus]
358 aa protein
accession:NP_079921.2
U5 small nuclear ribonucleoprotein 40 kDa protein
...
U5 small nuclear ribonucleoprotein 40 kDa protein [Homo sapiens]
357 aa protein
accession:NP_004805.2
DOMAINS: and other(s) domains
...
uncharacterized protein Dmel_CG3436, isoform C [Drosophila melanogaster]
347 aa protein
accession:NP_001285543.1
Transducin/WD40 repeat-like superfamily protein [Arabidopsis thaliana]
343 aa protein
accession:NP_181905.1
U5 small nuclear ribonucleoprotein 40 kDa protein-like [Glycine max]
345 aa protein
accession:XP_040868426.1
U5 small nuclear ribonucleoprotein 40 kDa protein [Danio rerio]
347 aa protein
accession:NP_956616.1
U5 small nuclear ribonucleoprotein 40 kDa protein [Mus musculus]
358 aa protein
accession:NP_079921.2
U5 small nuclear ribonucleoprotein 40 kDa protein [Homo sapiens]
357 aa protein
accession:NP_004805.2
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 734 | 734 | 100% | 0.0 | 98.04% | NP_004805.2 | |
| 2 | 620 | 620 | 100% | 0.0 | 82.22% | NP_956616.1 | |
| 3 | 439 | 439 | 87% | 9e-154 | 61.46% | NP_001285543.1 | |
| 4 | 435 | 435 | 86% | 3e-152 | 61.49% | NP_181905.1 | |
| 5 | 431 | 431 | 90% | 2e-150 | 58.77% | XP_040868426.1 |