Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_081175.2
RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [Mus musculus]
...
Query length:
194 aa
DOMAINS: and other(s) domains
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Ssu72-like family protein
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Ssu72-like family protein [Arabidopsis thaliana]
209 aa protein
accession:NP_001320369.1
RNA polymerase II subunit A C-terminal domain phosphatase
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RNA polymerase II subunit A C-terminal domain phosphatase [Saccharomyces cerevisiae S288C]
206 aa protein
accession:NP_014177.1
Ssu72 CTD phosphatase, isoform C
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Ssu72 CTD phosphatase, isoform C [Drosophila melanogaster]
195 aa protein
accession:NP_001285455.1
Query: RNA polymerase II subunit A C-terminal domain phosphatase SSU72
...
RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [Mus musculus]
194 aa protein
accession:NP_081175.2
RNA polymerase II subunit A C-terminal domain phosphatase SSU72 like protein 3
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RNA polymerase II subunit A C-terminal domain phosphatase SSU72 like protein 3 [Homo sapiens]
194 aa protein
accession:NP_001400929.1
RNA polymerase II subunit A C-terminal domain phosphatase SSU72 like protein 4
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RNA polymerase II subunit A C-terminal domain phosphatase SSU72 like protein 4 [Homo sapiens]
194 aa protein
accession:NP_001400930.1
DOMAINS: and other(s) domains
...
Ssu72-like family protein [Arabidopsis thaliana]
209 aa protein
accession:NP_001320369.1
RNA polymerase II subunit A C-terminal domain phosphatase [Saccharomyces cerevisiae S288C]
206 aa protein
accession:NP_014177.1
Ssu72 CTD phosphatase, isoform C [Drosophila melanogaster]
195 aa protein
accession:NP_001285455.1
RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [Mus musculus]
194 aa protein
accession:NP_081175.2
RNA polymerase II subunit A C-terminal domain phosphatase SSU72 like protein 3 [Homo sapiens]
194 aa protein
accession:NP_001400929.1
RNA polymerase II subunit A C-terminal domain phosphatase SSU72 like protein 4 [Homo sapiens]
194 aa protein
accession:NP_001400930.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Alignments
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Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 289 | 289 | 100% | 7e-100 | 72.16% | NP_001400929.1 | |
| 2 | 247 | 247 | 98% | 3e-83 | 60.73% | NP_001285455.1 | |
| 3 | 214 | 214 | 99% | 4e-70 | 50.77% | NP_001320369.1 | |
| 4 | 174 | 174 | 92% | 1e-54 | 46.07% | NP_014177.1 | |
| 5 | 287 | 287 | 100% | 3e-99 | 71.65% | NP_001400930.1 |