Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_082316.1
pseudouridylate synthase RPUSD4, mitochondrial [Mus musculus]
...
Query length:
377 aa
DOMAINS: and other(s) domains
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mitochondrial mRNA pseudouridine synthase RPUSD3 isoform X2
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mitochondrial mRNA pseudouridine synthase RPUSD3 isoform X2 [Rattus norvegicus]
275 aa protein
accession:XP_063142373.1
RNA pseudouridine synthase 4, mitochondrial isoform X5
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RNA pseudouridine synthase 4, mitochondrial isoform X5 [Glycine max]
397 aa protein
accession:XP_014633041.1
Pseudouridine synthase family protein
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Pseudouridine synthase family protein [Arabidopsis thaliana]
369 aa protein
accession:NP_001321502.1
23S rRNA pseudouridine(955/2504/2580) synthase RluC
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23S rRNA pseudouridine(955/2504/2580) synthase RluC [Shewanella oneidensis]
319 aa protein
accession:WP_011072718.1
Query: pseudouridylate synthase RPUSD4, mitochondrial
...
pseudouridylate synthase RPUSD4, mitochondrial [Mus musculus]
377 aa protein
accession:NP_082316.1
pseudouridylate synthase RPUSD4, mitochondrial
...
pseudouridylate synthase RPUSD4, mitochondrial [Danio rerio]
358 aa protein
accession:NP_001003495.1
DOMAINS: and other(s) domains
...
mitochondrial mRNA pseudouridine synthase RPUSD3 isoform X2 [Rattus norvegicus]
275 aa protein
accession:XP_063142373.1
RNA pseudouridine synthase 4, mitochondrial isoform X5 [Glycine max]
397 aa protein
accession:XP_014633041.1
Pseudouridine synthase family protein [Arabidopsis thaliana]
369 aa protein
accession:NP_001321502.1
23S rRNA pseudouridine(955/2504/2580) synthase RluC [Shewanella oneidensis]
319 aa protein
accession:WP_011072718.1
pseudouridylate synthase RPUSD4, mitochondrial [Mus musculus]
377 aa protein
accession:NP_082316.1
pseudouridylate synthase RPUSD4, mitochondrial [Danio rerio]
358 aa protein
accession:NP_001003495.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 330 | 330 | 85% | 9e-111 | 50.61% | NP_001003495.1 | |
| 2 | 101 | 101 | 67% | 7e-23 | 27.91% | XP_014633041.1 | |
| 3 | 96.3 | 96.3 | 66% | 2e-21 | 29.20% | WP_011072718.1 | |
| 4 | 93.2 | 93.2 | 53% | 1e-20 | 35.29% | XP_063142373.1 | |
| 5 | 92.8 | 92.8 | 63% | 6e-20 | 29.14% | NP_001321502.1 |