Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: NP_083125.1 claudin domain-containing protein 2 isoform 1 [Mus musculus] ... Query length: 167 aa

lens intrinsic membrane protein 2.4 ...

lens intrinsic membrane protein 2.4 [Danio rerio]

173 aa protein

accession:NP_001002407.1

Alignment Sequence Identical proteins

claudin domain-containing protein 2 ...

claudin domain-containing protein 2 [Homo sapiens]

167 aa protein

accession:NP_689566.1

Alignment Sequence Identical proteins

claudin domain-containing protein 2 ...

claudin domain-containing protein 2 [Rattus norvegicus]

167 aa protein

accession:NP_001102613.1

Alignment Sequence Identical proteins

claudin domain-containing protein 2 isoform X2 ...

claudin domain-containing protein 2 isoform X2 [Mus musculus]

200 aa protein

accession:XP_030098888.1

Alignment Sequence Identical proteins

Query: claudin domain-containing protein 2 isoform 1 ...

claudin domain-containing protein 2 isoform 1 [Mus musculus]

167 aa protein

accession:NP_083125.1

Sequence Identical proteins

claudin domain-containing protein 2 isoform X4 ...

claudin domain-containing protein 2 isoform X4 [Mus musculus]

168 aa protein

accession:XP_030098890.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|XP_030098890.1\|	claudin domain-containing protein 2 isoform X4 [Mus musculus]	335	335	99%	2e-118	99.40%	XP_030098890.1
2 Select seq ref\|NP_001102613.1\|	claudin domain-containing protein 2 [Rattus norvegicus]	266	266	100%	2e-91	90.42%	NP_001102613.1
3 Select seq ref\|NP_689566.1\|	claudin domain-containing protein 2 [Homo sapiens]	214	214	100%	8e-71	70.06%	NP_689566.1
4 Select seq ref\|NP_001002407.1\|	lens intrinsic membrane protein 2.4 [Danio rerio]	63.2	63.2	92%	1e-11	29.55%	NP_001002407.1
5 Select seq ref\|XP_030098888.1\|	claudin domain-containing protein 2 isoform X2 [Mus musculus]	292	292	86%	3e-101	100.00%	XP_030098888.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments