Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_110502.2
sodium channel protein type 1 subunit alpha [Rattus norvegicus]
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Query length:
2009 aa
DOMAINS: and other(s) domains
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sodium channel, voltage-gated, type I like, alpha b isoform X2
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sodium channel, voltage-gated, type I like, alpha b isoform X2 [Danio rerio]
1996 aa protein
accession:XP_021332559.1
sodium channel protein type 1 subunit alpha isoform 1
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sodium channel protein type 1 subunit alpha isoform 1 [Homo sapiens]
2009 aa protein
accession:NP_001159435.1
sodium channel protein type 1 subunit alpha isoform X1
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sodium channel protein type 1 subunit alpha isoform X1 [Homo sapiens]
2008 aa protein
accession:XP_047301348.1
Query: sodium channel protein type 1 subunit alpha
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sodium channel protein type 1 subunit alpha [Rattus norvegicus]
2009 aa protein
accession:NP_110502.2
sodium channel protein type 1 subunit alpha isoform 1
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sodium channel protein type 1 subunit alpha isoform 1 [Mus musculus]
2009 aa protein
accession:NP_001300926.1
sodium channel protein type 1 subunit alpha isoform 2
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sodium channel protein type 1 subunit alpha isoform 2 [Mus musculus]
1998 aa protein
accession:NP_061203.2
DOMAINS: and other(s) domains
...
sodium channel, voltage-gated, type I like, alpha b isoform X2 [Danio rerio]
1996 aa protein
accession:XP_021332559.1
sodium channel protein type 1 subunit alpha isoform 1 [Homo sapiens]
2009 aa protein
accession:NP_001159435.1
sodium channel protein type 1 subunit alpha isoform X1 [Homo sapiens]
2008 aa protein
accession:XP_047301348.1
sodium channel protein type 1 subunit alpha [Rattus norvegicus]
2009 aa protein
accession:NP_110502.2
sodium channel protein type 1 subunit alpha isoform 1 [Mus musculus]
2009 aa protein
accession:NP_001300926.1
sodium channel protein type 1 subunit alpha isoform 2 [Mus musculus]
1998 aa protein
accession:NP_061203.2
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 4140 | 4140 | 100% | 0.0 | 99.40% | NP_001300926.1 | |
| 2 | 4104 | 4104 | 100% | 0.0 | 98.21% | NP_001159435.1 | |
| 3 | 3082 | 3082 | 100% | 0.0 | 77.26% | XP_021332559.1 | |
| 4 | 4108 | 4108 | 100% | 0.0 | 98.86% | NP_061203.2 | |
| 5 | 4095 | 4095 | 100% | 0.0 | 98.16% | XP_047301348.1 |