Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_112591.2
gamma-secretase subunit APH-1B isoform 1 [Homo sapiens]
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Query length:
257 aa
DOMAINS: and other(s) domains
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gamma-secretase subunit Aph-1
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gamma-secretase subunit Aph-1 [Dictyostelium discoideum AX4]
328 aa protein
accession:XP_647460.1
gamma-secretase subunit APH1-like protein
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gamma-secretase subunit APH1-like protein [Arabidopsis thaliana]
250 aa protein
accession:NP_001325103.1
gamma-secretase subunit APH1-like isoform X3
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gamma-secretase subunit APH1-like isoform X3 [Glycine max]
207 aa protein
accession:XP_040862646.1
Query: gamma-secretase subunit APH-1B isoform 1
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gamma-secretase subunit APH-1B isoform 1 [Homo sapiens]
257 aa protein
accession:NP_112591.2
similar to anterior pharynx defective 1b homolog isoform X1
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similar to anterior pharynx defective 1b homolog isoform X1 [Rattus norvegicus]
262 aa protein
accession:XP_063122263.1
putative gamma-secretase subunit APH-1C isoform 2
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putative gamma-secretase subunit APH-1C isoform 2 [Mus musculus]
208 aa protein
accession:NP_001397423.1
DOMAINS: and other(s) domains
...
gamma-secretase subunit Aph-1 [Dictyostelium discoideum AX4]
328 aa protein
accession:XP_647460.1
gamma-secretase subunit APH1-like protein [Arabidopsis thaliana]
250 aa protein
accession:NP_001325103.1
gamma-secretase subunit APH1-like isoform X3 [Glycine max]
207 aa protein
accession:XP_040862646.1
gamma-secretase subunit APH-1B isoform 1 [Homo sapiens]
257 aa protein
accession:NP_112591.2
similar to anterior pharynx defective 1b homolog isoform X1 [Rattus norvegicus]
262 aa protein
accession:XP_063122263.1
putative gamma-secretase subunit APH-1C isoform 2 [Mus musculus]
208 aa protein
accession:NP_001397423.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
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Alignments
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Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 349 | 349 | 85% | 1e-121 | 81.00% | XP_063122263.1 | |
| 2 | 322 | 322 | 80% | 7e-112 | 79.33% | NP_001397423.1 | |
| 3 | 84.0 | 84.0 | 80% | 2e-18 | 31.13% | NP_001325103.1 | |
| 4 | 78.2 | 78.2 | 70% | 1e-16 | 29.95% | XP_040862646.1 | |
| 5 | 64.3 | 64.3 | 44% | 4e-11 | 34.48% | XP_647460.1 |