Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: NP_113889.1 claudin-5 [Rattus norvegicus] ... Query length: 218 aa

claudin 5a ...

claudin 5a [Danio rerio]

215 aa protein

accession:NP_998439.1

Alignment Sequence Identical proteins

claudin-5b ...

claudin-5b [Danio rerio]

220 aa protein

accession:NP_001006044.2

Alignment Sequence Identical proteins

claudin-5 isoform 2 ...

claudin-5 isoform 2 [Homo sapiens]

218 aa protein

accession:NP_001349995.1

Alignment Sequence Identical proteins

claudin-5 isoform 1 ...

claudin-5 isoform 1 [Homo sapiens]

303 aa protein

accession:NP_001124333.1

Alignment Sequence Identical proteins

Query: claudin-5 ...

claudin-5 [Rattus norvegicus]

218 aa protein

accession:NP_113889.1

Sequence Identical proteins

claudin-5 ...

claudin-5 [Mus musculus]

218 aa protein

accession:NP_038833.2

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_038833.2\|	claudin-5 [Mus musculus]	432	432	100%	2e-155	99.08%	NP_038833.2
2 Select seq ref\|NP_001349995.1\|	claudin-5 isoform 2 [Homo sapiens]	400	400	100%	1e-142	91.28%	NP_001349995.1
3 Select seq ref\|NP_998439.1\|	claudin 5a [Danio rerio]	257	257	100%	2e-86	56.88%	NP_998439.1
4 Select seq ref\|NP_001124333.1\|	claudin-5 isoform 1 [Homo sapiens]	400	400	100%	1e-141	91.28%	NP_001124333.1
5 Select seq ref\|NP_001006044.2\|	claudin-5b [Danio rerio]	245	245	100%	2e-81	52.91%	NP_001006044.2

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments