Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: NP_114129.1 transcription initiation factor TFIID subunit 3 [Homo sapiens] ... Query length: 929 aa

hypothetical protein DDB_G0285493 ...

hypothetical protein DDB_G0285493 [Dictyostelium discoideum AX4]

374 aa protein

accession:XP_638088.1

Alignment Sequence Identical proteins

TBP-associated factor 3 ...

TBP-associated factor 3 [Drosophila melanogaster]

1406 aa protein

accession:NP_651923.2

Alignment Sequence Identical proteins

transcription initiation factor TFIID subunit 3 ...

transcription initiation factor TFIID subunit 3 [Danio rerio]

898 aa protein

accession:NP_001036209.1

Alignment Sequence Identical proteins

transcription initiation factor TFIID subunit 3 ...

transcription initiation factor TFIID subunit 3 [Mus musculus]

932 aa protein

accession:NP_082024.2

Alignment Sequence Identical proteins

Query: transcription initiation factor TFIID subunit 3 ...

transcription initiation factor TFIID subunit 3 [Homo sapiens]

929 aa protein

accession:NP_114129.1

Sequence Identical proteins

transcription initiation factor TFIID subunit 3 isoform X1 ...

transcription initiation factor TFIID subunit 3 isoform X1 [Homo sapiens]

928 aa protein

accession:XP_011518043.2

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|XP_011518043.2\|	transcription initiation factor TFIID subunit 3 isoform X1 [Homo sapiens]	1850	1850	100%	0.0	99.89%	XP_011518043.2
2 Select seq ref\|NP_082024.2\|	transcription initiation factor TFIID subunit 3 [Mus musculus]	1263	1263	98%	0.0	84.33%	NP_082024.2
3 Select seq ref\|NP_001036209.1\|	transcription initiation factor TFIID subunit 3 [Danio rerio]	267	421	61%	9e-75	43.29%	NP_001036209.1
4 Select seq ref\|NP_651923.2\|	TBP-associated factor 3 [Drosophila melanogaster]	109	214	22%	1e-22	35.62%	NP_651923.2
5 Select seq ref\|XP_638088.1\|	hypothetical protein DDB_G0285493 [Dictyostelium discoideum AX4]	88.6	88.6	13%	3e-17	35.11%	XP_638088.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments