Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_114188.1
transient receptor potential cation channel subfamily V member 1 [Rattus norvegicus]
...
Query length:
838 aa
DOMAINS: and other(s) domains
...
transient receptor potential cation channel subfamily V member 4
...
transient receptor potential cation channel subfamily V member 4 [Rattus norvegicus]
871 aa protein
accession:NP_076460.1
transient receptor potential cation channel subfamily V member 4 isoform X1
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transient receptor potential cation channel subfamily V member 4 isoform X1 [Homo sapiens]
922 aa protein
accession:XP_011536932.2
transient receptor potential cation channel subfamily V member 4 isoform X2
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transient receptor potential cation channel subfamily V member 4 isoform X2 [Danio rerio]
858 aa protein
accession:XP_005165209.1
transient receptor potential cation channel subfamily V member 1
...
transient receptor potential cation channel subfamily V member 1 [Homo sapiens]
839 aa protein
accession:NP_061197.4
Query: transient receptor potential cation channel subfamily V member 1
...
transient receptor potential cation channel subfamily V member 1 [Rattus norvegicus]
838 aa protein
accession:NP_114188.1
transient receptor potential cation channel subfamily V member 1
...
transient receptor potential cation channel subfamily V member 1 [Mus musculus]
839 aa protein
accession:NP_001001445.1
DOMAINS: and other(s) domains
...
transient receptor potential cation channel subfamily V member 4 [Rattus norvegicus]
871 aa protein
accession:NP_076460.1
transient receptor potential cation channel subfamily V member 4 isoform X1 [Homo sapiens]
922 aa protein
accession:XP_011536932.2
transient receptor potential cation channel subfamily V member 4 isoform X2 [Danio rerio]
858 aa protein
accession:XP_005165209.1
transient receptor potential cation channel subfamily V member 1 [Homo sapiens]
839 aa protein
accession:NP_061197.4
transient receptor potential cation channel subfamily V member 1 [Rattus norvegicus]
838 aa protein
accession:NP_114188.1
transient receptor potential cation channel subfamily V member 1 [Mus musculus]
839 aa protein
accession:NP_001001445.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 1664 | 1664 | 100% | 0.0 | 95.23% | NP_001001445.1 | |
| 2 | 1496 | 1496 | 100% | 0.0 | 85.83% | NP_061197.4 | |
| 3 | 709 | 709 | 81% | 0.0 | 51.16% | NP_076460.1 | |
| 4 | 701 | 701 | 84% | 0.0 | 49.72% | XP_005165209.1 | |
| 5 | 711 | 711 | 81% | 0.0 | 51.30% | XP_011536932.2 |