Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_116710.1
proteasome regulatory particle lid subunit RPN12 [Saccharomyces cerevisiae S288C]
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Query length:
274 aa
DOMAINS: and other(s) domains
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26S proteasome regulatory subunit S14
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26S proteasome regulatory subunit S14 [Dictyostelium discoideum AX4]
263 aa protein
accession:XP_644348.1
26S proteasome non-ATPase regulatory subunit 8
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26S proteasome non-ATPase regulatory subunit 8 [Homo sapiens]
350 aa protein
accession:NP_002803.2
26S proteasome non-ATPase regulatory subunit 8
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26S proteasome non-ATPase regulatory subunit 8 [Mus musculus]
353 aa protein
accession:NP_080821.3
26S proteasome non-ATPase regulatory subunit 8
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26S proteasome non-ATPase regulatory subunit 8 [Rattus norvegicus]
353 aa protein
accession:NP_001094301.1
Query: proteasome regulatory particle lid subunit RPN12
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proteasome regulatory particle lid subunit RPN12 [Saccharomyces cerevisiae S288C]
274 aa protein
accession:NP_116710.1
19S proteasome regulatory subunit Rpn12
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19S proteasome regulatory subunit Rpn12 [Schizosaccharomyces pombe]
270 aa protein
accession:NP_596750.2
DOMAINS: and other(s) domains
...
26S proteasome regulatory subunit S14 [Dictyostelium discoideum AX4]
263 aa protein
accession:XP_644348.1
26S proteasome non-ATPase regulatory subunit 8 [Homo sapiens]
350 aa protein
accession:NP_002803.2
26S proteasome non-ATPase regulatory subunit 8 [Mus musculus]
353 aa protein
accession:NP_080821.3
26S proteasome non-ATPase regulatory subunit 8 [Rattus norvegicus]
353 aa protein
accession:NP_001094301.1
proteasome regulatory particle lid subunit RPN12 [Saccharomyces cerevisiae S288C]
274 aa protein
accession:NP_116710.1
19S proteasome regulatory subunit Rpn12 [Schizosaccharomyces pombe]
270 aa protein
accession:NP_596750.2
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Alignments
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Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 133 | 133 | 93% | 3e-36 | 33.59% | NP_596750.2 | |
| 2 | 110 | 110 | 80% | 1e-27 | 32.43% | XP_644348.1 | |
| 3 | 109 | 109 | 91% | 2e-26 | 32.94% | NP_002803.2 | |
| 4 | 109 | 109 | 94% | 2e-26 | 32.05% | NP_080821.3 | |
| 5 | 107 | 107 | 91% | 1e-25 | 32.54% | NP_001094301.1 |