Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_149088.1
vacuolar protein sorting-associated protein 52 homolog [Rattus norvegicus]
...
Query length:
723 aa
DOMAINS: and other(s) domains
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Vps52 / Sac2 family
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Vps52 / Sac2 family [Arabidopsis thaliana]
701 aa protein
accession:NP_001320711.1
vacuolar protein sorting-associated protein 52 A isoform X2
...
vacuolar protein sorting-associated protein 52 A isoform X2 [Glycine max]
590 aa protein
accession:XP_040868683.1
vacuolar protein sorting-associated protein 52 homolog isoform X1
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vacuolar protein sorting-associated protein 52 homolog isoform X1 [Danio rerio]
724 aa protein
accession:XP_068071368.1
vacuolar protein sorting-associated protein 52 homolog isoform 1
...
vacuolar protein sorting-associated protein 52 homolog isoform 1 [Homo sapiens]
723 aa protein
accession:NP_072047.4
Query: vacuolar protein sorting-associated protein 52 homolog
...
vacuolar protein sorting-associated protein 52 homolog [Rattus norvegicus]
723 aa protein
accession:NP_149088.1
vacuolar protein sorting-associated protein 52 homolog isoform X3
...
vacuolar protein sorting-associated protein 52 homolog isoform X3 [Rattus norvegicus]
615 aa protein
accession:XP_063135043.1
DOMAINS: and other(s) domains
...
Vps52 / Sac2 family [Arabidopsis thaliana]
701 aa protein
accession:NP_001320711.1
vacuolar protein sorting-associated protein 52 A isoform X2 [Glycine max]
590 aa protein
accession:XP_040868683.1
vacuolar protein sorting-associated protein 52 homolog isoform X1 [Danio rerio]
724 aa protein
accession:XP_068071368.1
vacuolar protein sorting-associated protein 52 homolog isoform 1 [Homo sapiens]
723 aa protein
accession:NP_072047.4
vacuolar protein sorting-associated protein 52 homolog [Rattus norvegicus]
723 aa protein
accession:NP_149088.1
vacuolar protein sorting-associated protein 52 homolog isoform X3 [Rattus norvegicus]
615 aa protein
accession:XP_063135043.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 1461 | 1461 | 100% | 0.0 | 98.34% | NP_072047.4 | |
| 2 | 1220 | 1220 | 82% | 0.0 | 97.24% | XP_063135043.1 | |
| 3 | 1136 | 1136 | 94% | 0.0 | 75.91% | XP_068071368.1 | |
| 4 | 429 | 429 | 97% | 9e-140 | 34.64% | NP_001320711.1 | |
| 5 | 376 | 376 | 82% | 5e-121 | 35.04% | XP_040868683.1 |