Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_172778.1
RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis thaliana]
...
Query length:
573 aa
DOMAINS: and other(s) domains
...
RNA-binding motif protein, X chromosome retrogene-like
...
RNA-binding motif protein, X chromosome retrogene-like [Rattus norvegicus]
388 aa protein
accession:NP_001100890.1
RNA-binding region RNP-1 domain-containing protein
...
RNA-binding region RNP-1 domain-containing protein [Dictyostelium discoideum AX4]
952 aa protein
accession:XP_639372.1
cleavage and polyadenylation specific factor 6, isoform A
...
cleavage and polyadenylation specific factor 6, isoform A [Drosophila melanogaster]
652 aa protein
accession:NP_648206.1
Query: RNA-binding (RRM/RBD/RNP motifs) family protein
...
RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis thaliana]
573 aa protein
accession:NP_172778.1
cleavage and polyadenylation specificity factor subunit 6
...
cleavage and polyadenylation specificity factor subunit 6 [Glycine max]
693 aa protein
accession:XP_003532176.1
RNA-binding (RRM/RBD/RNP motifs) family protein
...
RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis thaliana]
710 aa protein
accession:NP_200378.1
DOMAINS: and other(s) domains
...
RNA-binding motif protein, X chromosome retrogene-like [Rattus norvegicus]
388 aa protein
accession:NP_001100890.1
RNA-binding region RNP-1 domain-containing protein [Dictyostelium discoideum AX4]
952 aa protein
accession:XP_639372.1
cleavage and polyadenylation specific factor 6, isoform A [Drosophila melanogaster]
652 aa protein
accession:NP_648206.1
RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis thaliana]
573 aa protein
accession:NP_172778.1
cleavage and polyadenylation specificity factor subunit 6 [Glycine max]
693 aa protein
accession:XP_003532176.1
RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis thaliana]
710 aa protein
accession:NP_200378.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
Select:AllNone
Selected:0
Alignments
Download
GenPept
Graphics
Distance tree of results
Multiple alignment
Show/hide columns of the table presenting best hits
Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 228 | 228 | 64% | 1e-64 | 40.30% | XP_003532176.1 | |
| 2 | 212 | 212 | 97% | 6e-59 | 32.91% | NP_200378.1 | |
| 3 | 65.5 | 65.5 | 13% | 1e-09 | 35.53% | XP_639372.1 | |
| 4 | 63.2 | 63.2 | 15% | 6e-09 | 33.33% | NP_648206.1 | |
| 5 | 57.8 | 57.8 | 13% | 2e-07 | 36.84% | NP_001100890.1 |