Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_176564.1
Ribosomal RNA processing Brix domain protein [Arabidopsis thaliana]
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Query length:
294 aa
DOMAINS: and other(s) domains
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U3 small nucleolar ribonucleoprotein protein
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U3 small nucleolar ribonucleoprotein protein [Dictyostelium discoideum AX4]
286 aa protein
accession:XP_002649153.1
U3 small nucleolar ribonucleoprotein protein IMP4
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U3 small nucleolar ribonucleoprotein protein IMP4 [Danio rerio]
291 aa protein
accession:NP_001002719.1
U3 small nucleolar ribonucleoprotein protein IMP4 isoform 1
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U3 small nucleolar ribonucleoprotein protein IMP4 isoform 1 [Mus musculus]
291 aa protein
accession:NP_848716.2
U3 small nucleolar ribonucleoprotein protein IMP4 isoform a
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U3 small nucleolar ribonucleoprotein protein IMP4 isoform a [Homo sapiens]
291 aa protein
accession:NP_219484.1
Query: Ribosomal RNA processing Brix domain protein
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Ribosomal RNA processing Brix domain protein [Arabidopsis thaliana]
294 aa protein
accession:NP_176564.1
U3 small nucleolar ribonucleoprotein protein IMP4-like
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U3 small nucleolar ribonucleoprotein protein IMP4-like [Glycine max]
293 aa protein
accession:NP_001242782.2
DOMAINS: and other(s) domains
...
U3 small nucleolar ribonucleoprotein protein [Dictyostelium discoideum AX4]
286 aa protein
accession:XP_002649153.1
U3 small nucleolar ribonucleoprotein protein IMP4 [Danio rerio]
291 aa protein
accession:NP_001002719.1
U3 small nucleolar ribonucleoprotein protein IMP4 isoform 1 [Mus musculus]
291 aa protein
accession:NP_848716.2
U3 small nucleolar ribonucleoprotein protein IMP4 isoform a [Homo sapiens]
291 aa protein
accession:NP_219484.1
Ribosomal RNA processing Brix domain protein [Arabidopsis thaliana]
294 aa protein
accession:NP_176564.1
U3 small nucleolar ribonucleoprotein protein IMP4-like [Glycine max]
293 aa protein
accession:NP_001242782.2
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 489 | 489 | 99% | 2e-175 | 78.50% | NP_001242782.2 | |
| 2 | 342 | 342 | 99% | 3e-117 | 55.82% | XP_002649153.1 | |
| 3 | 318 | 318 | 99% | 8e-108 | 50.00% | NP_001002719.1 | |
| 4 | 301 | 301 | 95% | 4e-101 | 50.00% | NP_848716.2 | |
| 5 | 300 | 300 | 95% | 5e-101 | 50.00% | NP_219484.1 |