Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_189872.1
zinc knuckle (CCHC-type) family protein [Arabidopsis thaliana]
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Query length:
372 aa
DOMAINS: and other(s) domains
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Query: zinc knuckle (CCHC-type) family protein
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zinc knuckle (CCHC-type) family protein [Arabidopsis thaliana]
372 aa protein
accession:NP_189872.1
cold shock domain protein 1
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cold shock domain protein 1 [Arabidopsis thaliana]
299 aa protein
accession:NP_001320149.1
translational activator, zf-CCHC type zinc finger protein
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translational activator, zf-CCHC type zinc finger protein [Schizosaccharomyces pombe]
179 aa protein
accession:NP_593680.1
universal minicircle sequence binding protein (UMSBP), putative
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universal minicircle sequence binding protein (UMSBP), putative [Leishmania donovani]
271 aa protein
accession:XP_003865287.1
zinc finger CCHC domain-containing protein 13
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zinc finger CCHC domain-containing protein 13 [Mus musculus]
170 aa protein
accession:NP_083434.1
zinc finger CCHC domain-containing protein 13
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zinc finger CCHC domain-containing protein 13 [Rattus norvegicus]
170 aa protein
accession:NP_001388052.1
DOMAINS: and other(s) domains
...
zinc knuckle (CCHC-type) family protein [Arabidopsis thaliana]
372 aa protein
accession:NP_189872.1
cold shock domain protein 1 [Arabidopsis thaliana]
299 aa protein
accession:NP_001320149.1
translational activator, zf-CCHC type zinc finger protein [Schizosaccharomyces pombe]
179 aa protein
accession:NP_593680.1
universal minicircle sequence binding protein (UMSBP), putative [Leishmania donovani]
271 aa protein
accession:XP_003865287.1
zinc finger CCHC domain-containing protein 13 [Mus musculus]
170 aa protein
accession:NP_083434.1
zinc finger CCHC domain-containing protein 13 [Rattus norvegicus]
170 aa protein
accession:NP_001388052.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Alignments
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Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 85.9 | 242 | 46% | 2e-17 | 39.52% | NP_001320149.1 | |
| 2 | 82.8 | 318 | 35% | 1e-16 | 40.16% | XP_003865287.1 | |
| 3 | 73.6 | 182 | 34% | 5e-14 | 36.76% | NP_593680.1 | |
| 4 | 69.7 | 214 | 36% | 9e-13 | 33.09% | NP_083434.1 | |
| 5 | 69.7 | 182 | 36% | 1e-12 | 29.93% | NP_001388052.1 |