Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_192591.1
mediator of RNA polymerase II transcription subunit-like protein [Arabidopsis thaliana]
...
Query length:
551 aa
DOMAINS: and other(s) domains
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uncharacterized protein LOC100800475 isoform X1
...
uncharacterized protein LOC100800475 isoform X1 [Glycine max]
621 aa protein
accession:XP_003542703.1
mediator of RNA polymerase II transcription subunit 1
...
mediator of RNA polymerase II transcription subunit 1 [Glycine max]
618 aa protein
accession:XP_003544160.1
mediator of RNA polymerase II transcription subunit 1
...
mediator of RNA polymerase II transcription subunit 1 [Glycine max]
614 aa protein
accession:XP_006581570.1
C-jun-amino-terminal kinase-interacting protein
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C-jun-amino-terminal kinase-interacting protein [Arabidopsis thaliana]
581 aa protein
accession:NP_174891.1
Query: mediator of RNA polymerase II transcription subunit-like protein
...
mediator of RNA polymerase II transcription subunit-like protein [Arabidopsis thaliana]
551 aa protein
accession:NP_192591.1
mediator of RNA polymerase II transcription subunit-like protein
...
mediator of RNA polymerase II transcription subunit-like protein [Arabidopsis thaliana]
548 aa protein
accession:NP_001329415.1
DOMAINS: and other(s) domains
...
uncharacterized protein LOC100800475 isoform X1 [Glycine max]
621 aa protein
accession:XP_003542703.1
mediator of RNA polymerase II transcription subunit 1 [Glycine max]
618 aa protein
accession:XP_003544160.1
mediator of RNA polymerase II transcription subunit 1 [Glycine max]
614 aa protein
accession:XP_006581570.1
C-jun-amino-terminal kinase-interacting protein [Arabidopsis thaliana]
581 aa protein
accession:NP_174891.1
mediator of RNA polymerase II transcription subunit-like protein [Arabidopsis thaliana]
551 aa protein
accession:NP_192591.1
mediator of RNA polymerase II transcription subunit-like protein [Arabidopsis thaliana]
548 aa protein
accession:NP_001329415.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 1096 | 1096 | 97% | 0.0 | 99.81% | NP_001329415.1 | |
| 2 | 311 | 311 | 99% | 4e-97 | 39.26% | XP_003542703.1 | |
| 3 | 575 | 575 | 100% | 0.0 | 59.14% | NP_174891.1 | |
| 4 | 308 | 308 | 99% | 6e-96 | 40.20% | XP_003544160.1 | |
| 5 | 281 | 281 | 94% | 1e-85 | 40.00% | XP_006581570.1 |