Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_196048.1
RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein [Arabidopsis thaliana]
...
Query length:
310 aa
DOMAINS: and other(s) domains
...
Hrp1p
...
Hrp1p [Saccharomyces cerevisiae S288C]
534 aa protein
accession:NP_014518.1
heterogeneous nuclear ribonucleoprotein at 27C, isoform D
...
heterogeneous nuclear ribonucleoprotein at 27C, isoform D [Drosophila melanogaster]
421 aa protein
accession:NP_001162897.1
glycine-rich RNA-binding protein RZ1C isoform X2
...
glycine-rich RNA-binding protein RZ1C isoform X2 [Glycine max]
279 aa protein
accession:XP_003536695.1
glycine-rich RNA-binding protein RZ1C isoform X1
...
glycine-rich RNA-binding protein RZ1C isoform X1 [Glycine max]
279 aa protein
accession:XP_003555886.1
Query: RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein
...
RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein [Arabidopsis thaliana]
310 aa protein
accession:NP_196048.1
RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein
...
RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein [Arabidopsis thaliana]
272 aa protein
accession:NP_001330677.1
DOMAINS: and other(s) domains
...
Hrp1p [Saccharomyces cerevisiae S288C]
534 aa protein
accession:NP_014518.1
heterogeneous nuclear ribonucleoprotein at 27C, isoform D [Drosophila melanogaster]
421 aa protein
accession:NP_001162897.1
glycine-rich RNA-binding protein RZ1C isoform X2 [Glycine max]
279 aa protein
accession:XP_003536695.1
glycine-rich RNA-binding protein RZ1C isoform X1 [Glycine max]
279 aa protein
accession:XP_003555886.1
RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein [Arabidopsis thaliana]
310 aa protein
accession:NP_196048.1
RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein [Arabidopsis thaliana]
272 aa protein
accession:NP_001330677.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 503 | 503 | 87% | 0.0 | 100.00% | NP_001330677.1 | |
| 2 | 253 | 253 | 100% | 2e-82 | 55.31% | XP_003536695.1 | |
| 3 | 80.5 | 147 | 28% | 2e-15 | 46.84% | NP_014518.1 | |
| 4 | 78.6 | 144 | 44% | 8e-15 | 49.25% | NP_001162897.1 | |
| 5 | 249 | 249 | 100% | 6e-81 | 54.98% | XP_003555886.1 |