Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_198143.1
nuclear factor Y, subunit C8 [Arabidopsis thaliana]
...
Query length:
187 aa
DOMAINS: and other(s) domains
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nuclear transcription factor Y subunit gamma isoform X4
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nuclear transcription factor Y subunit gamma isoform X4 [Danio rerio]
335 aa protein
accession:XP_009292657.1
nuclear transcription factor Y subunit gamma isoform X2
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nuclear transcription factor Y subunit gamma isoform X2 [Rattus norvegicus]
189 aa protein
accession:XP_038965226.1
nuclear transcription factor Y subunit gamma isoform 9
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nuclear transcription factor Y subunit gamma isoform 9 [Mus musculus]
282 aa protein
accession:NP_001408220.1
nuclear factor Y transcription factor family protein
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nuclear factor Y transcription factor family protein [Glycine max]
222 aa protein
accession:NP_001349558.1
Query: nuclear factor Y, subunit C8
...
nuclear factor Y, subunit C8 [Arabidopsis thaliana]
187 aa protein
accession:NP_198143.1
nuclear factor Y, subunit C5
...
nuclear factor Y, subunit C5 [Arabidopsis thaliana]
186 aa protein
accession:NP_199860.1
DOMAINS: and other(s) domains
...
nuclear transcription factor Y subunit gamma isoform X4 [Danio rerio]
335 aa protein
accession:XP_009292657.1
nuclear transcription factor Y subunit gamma isoform X2 [Rattus norvegicus]
189 aa protein
accession:XP_038965226.1
nuclear transcription factor Y subunit gamma isoform 9 [Mus musculus]
282 aa protein
accession:NP_001408220.1
nuclear factor Y transcription factor family protein [Glycine max]
222 aa protein
accession:NP_001349558.1
nuclear factor Y, subunit C8 [Arabidopsis thaliana]
187 aa protein
accession:NP_198143.1
nuclear factor Y, subunit C5 [Arabidopsis thaliana]
186 aa protein
accession:NP_199860.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 232 | 232 | 89% | 2e-77 | 69.14% | NP_199860.1 | |
| 2 | 149 | 149 | 89% | 2e-44 | 49.15% | NP_001349558.1 | |
| 3 | 107 | 107 | 57% | 6e-27 | 43.44% | XP_009292657.1 | |
| 4 | 103 | 103 | 51% | 7e-27 | 47.06% | XP_038965226.1 | |
| 5 | 105 | 105 | 51% | 1e-26 | 47.06% | NP_001408220.1 |