Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: NP_199804.1 zinc knuckle (CCHC-type) family protein [Arabidopsis thaliana] ... Query length: 1080 aa

DUF814 family protein ...

DUF814 family protein [Dictyostelium discoideum AX4]

1268 aa protein

accession:XP_636153.1

Alignment Sequence Identical proteins

ribosome quality control complex subunit NEMF ...

ribosome quality control complex subunit NEMF [Mus musculus]

1064 aa protein

accession:NP_079717.2

Alignment Sequence Identical proteins

ribosome quality control complex subunit NEMF isoform 1 ...

ribosome quality control complex subunit NEMF isoform 1 [Homo sapiens]

1076 aa protein

accession:NP_004704.3

Alignment Sequence Identical proteins

caliban, isoform B ...

caliban, isoform B [Drosophila melanogaster]

992 aa protein

accession:NP_001163721.1

Alignment Sequence Identical proteins

Query: zinc knuckle (CCHC-type) family protein ...

zinc knuckle (CCHC-type) family protein [Arabidopsis thaliana]

1080 aa protein

accession:NP_199804.1

Sequence Identical proteins

nuclear export mediator factor NEMF isoform X1 ...

nuclear export mediator factor NEMF isoform X1 [Glycine max]

1143 aa protein

accession:XP_014617368.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|XP_014617368.1\|	nuclear export mediator factor NEMF isoform X1 [Glycine max]	1489	1489	98%	0.0	68.31%	XP_014617368.1
2 Select seq ref\|NP_079717.2\|	ribosome quality control complex subunit NEMF [Mus musculus]	650	650	98%	0.0	37.77%	NP_079717.2
3 Select seq ref\|NP_004704.3\|	ribosome quality control complex subunit NEMF isoform 1 [Homo sapiens]	632	632	98%	0.0	37.08%	NP_004704.3
4 Select seq ref\|NP_001163721.1\|	caliban, isoform B [Drosophila melanogaster]	583	583	98%	0.0	37.94%	NP_001163721.1
5 Select seq ref\|XP_636153.1\|	DUF814 family protein [Dictyostelium discoideum AX4]	524	615	73%	3e-165	39.13%	XP_636153.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments