Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: NP_291027.3 E3 ubiquitin-protein ligase TRIM41 isoform 1 [Homo sapiens] ... Query length: 630 aa

E3 ubiquitin-protein ligase TRIM69 isoform X1 ...

E3 ubiquitin-protein ligase TRIM69 isoform X1 [Danio rerio]

549 aa protein

accession:XP_009303917.1

Alignment Sequence Identical proteins

E3 ubiquitin-protein ligase TRIM39 isoform 2 ...

E3 ubiquitin-protein ligase TRIM39 isoform 2 [Homo sapiens]

488 aa protein

accession:NP_001356450.1

Alignment Sequence Identical proteins

zinc finger protein RFP isoform X1 ...

zinc finger protein RFP isoform X1 [Mus musculus]

513 aa protein

accession:XP_036013819.1

Alignment Sequence Identical proteins

E3 ubiquitin-protein ligase TRIM68 isoform X1 ...

E3 ubiquitin-protein ligase TRIM68 isoform X1 [Rattus norvegicus]

485 aa protein

accession:XP_063129891.1

Alignment Sequence Identical proteins

Query: E3 ubiquitin-protein ligase TRIM41 isoform 1 ...

E3 ubiquitin-protein ligase TRIM41 isoform 1 [Homo sapiens]

630 aa protein

accession:NP_291027.3

Sequence Identical proteins

E3 ubiquitin-protein ligase TRIM41 isoform X5 ...

E3 ubiquitin-protein ligase TRIM41 isoform X5 [Homo sapiens]

514 aa protein

accession:XP_047273824.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|XP_047273824.1\|	E3 ubiquitin-protein ligase TRIM41 isoform X5 [Homo sapiens]	994	994	77%	0.0	99.39%	XP_047273824.1
2 Select seq ref\|XP_036013819.1\|	zinc finger protein RFP isoform X1 [Mus musculus]	257	309	77%	3e-77	34.82%	XP_036013819.1
3 Select seq ref\|XP_063129891.1\|	E3 ubiquitin-protein ligase TRIM68 isoform X1 [Rattus norvegicus]	211	259	75%	2e-60	33.19%	XP_063129891.1
4 Select seq ref\|XP_009303917.1\|	E3 ubiquitin-protein ligase TRIM69 isoform X1 [Danio rerio]	195	249	75%	7e-54	30.34%	XP_009303917.1
5 Select seq ref\|NP_001356450.1\|	E3 ubiquitin-protein ligase TRIM39 isoform 2 [Homo sapiens]	288	346	75%	3e-89	37.73%	NP_001356450.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments