Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: NP_446345.3 syndecan-3 precursor [Rattus norvegicus] ... Query length: 442 aa

syndecan, isoform K ...

syndecan, isoform K [Drosophila melanogaster]

322 aa protein

accession:NP_726072.2

Alignment Sequence Identical proteins

syndecan, isoform H ...

syndecan, isoform H [Drosophila melanogaster]

266 aa protein

accession:NP_001286678.1

Alignment Sequence Identical proteins

syndecan-2 isoform X1 ...

syndecan-2 isoform X1 [Homo sapiens]

172 aa protein

accession:XP_047278032.1

Alignment Sequence Identical proteins

syndecan-3 ...

syndecan-3 [Danio rerio]

402 aa protein

accession:XP_001919756.7

Alignment Sequence Identical proteins

Query: syndecan-3 precursor ...

syndecan-3 precursor [Rattus norvegicus]

442 aa protein

accession:NP_446345.3

Sequence Identical proteins

syndecan-3 isoform 2 ...

syndecan-3 isoform 2 [Mus musculus]

348 aa protein

accession:NP_001411807.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_001411807.1\|	syndecan-3 isoform 2 [Mus musculus]	634	634	78%	0.0	95.98%	NP_001411807.1
2 Select seq ref\|XP_001919756.7\|	syndecan-3 [Danio rerio]	160	160	33%	7e-44	62.58%	XP_001919756.7
3 Select seq ref\|NP_726072.2\|	syndecan, isoform K [Drosophila melanogaster]	71.2	71.2	13%	1e-12	53.33%	NP_726072.2
4 Select seq ref\|XP_047278032.1\|	syndecan-2 isoform X1 [Homo sapiens]	63.5	63.5	14%	6e-11	63.64%	XP_047278032.1
5 Select seq ref\|NP_001286678.1\|	syndecan, isoform H [Drosophila melanogaster]	69.3	69.3	14%	3e-12	49.25%	NP_001286678.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments