Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_477156.1
clipper [Drosophila melanogaster]
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Query length:
296 aa
DOMAINS: and other(s) domains
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Cleavage and polyadenylation specificity factor subunit 4
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Cleavage and polyadenylation specificity factor subunit 4 [Caenorhabditis elegans]
302 aa protein
accession:NP_001023126.1
Query: clipper
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cleavage and polyadenylation specificity factor subunit 4 isoform 1
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cleavage and polyadenylation specificity factor subunit 4 isoform 1 [Homo sapiens]
269 aa protein
accession:NP_006684.1
cleavage and polyadenylation specificity factor subunit 4 isoform d
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cleavage and polyadenylation specificity factor subunit 4 isoform d [Mus musculus]
269 aa protein
accession:NP_001361645.1
cleavage and polyadenylation specificity factor subunit 4 isoform 1
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cleavage and polyadenylation specificity factor subunit 4 isoform 1 [Rattus norvegicus]
243 aa protein
accession:NP_001012351.1
cleavage and polyadenylation specificity factor subunit 4
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cleavage and polyadenylation specificity factor subunit 4 [Danio rerio]
271 aa protein
accession:NP_571084.1
DOMAINS: and other(s) domains
...
Cleavage and polyadenylation specificity factor subunit 4 [Caenorhabditis elegans]
302 aa protein
accession:NP_001023126.1
cleavage and polyadenylation specificity factor subunit 4 isoform 1 [Homo sapiens]
269 aa protein
accession:NP_006684.1
cleavage and polyadenylation specificity factor subunit 4 isoform d [Mus musculus]
269 aa protein
accession:NP_001361645.1
cleavage and polyadenylation specificity factor subunit 4 isoform 1 [Rattus norvegicus]
243 aa protein
accession:NP_001012351.1
cleavage and polyadenylation specificity factor subunit 4 [Danio rerio]
271 aa protein
accession:NP_571084.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 309 | 309 | 98% | 1e-104 | 54.11% | NP_006684.1 | |
| 2 | 308 | 308 | 98% | 2e-104 | 54.11% | NP_001361645.1 | |
| 3 | 308 | 308 | 98% | 5e-104 | 54.79% | NP_571084.1 | |
| 4 | 303 | 303 | 98% | 2e-102 | 53.08% | NP_001012351.1 | |
| 5 | 268 | 268 | 98% | 4e-88 | 46.28% | NP_001023126.1 |