Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_490728.2
Transcription initiation factor TFIID subunit 4 [Caenorhabditis elegans]
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Query length:
523 aa
DOMAINS: and other(s) domains
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Query: Transcription initiation factor TFIID subunit 4
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Transcription initiation factor TFIID subunit 4 [Caenorhabditis elegans]
523 aa protein
accession:NP_490728.2
transcription initiation factor TFIID subunit 4 isoform X1
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transcription initiation factor TFIID subunit 4 isoform X1 [Danio rerio]
949 aa protein
accession:XP_005163125.2
transcription initiation factor TFIID subunit 4B isoform 1
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transcription initiation factor TFIID subunit 4B isoform 1 [Homo sapiens]
867 aa protein
accession:NP_001280654.1
transcription initiation factor TFIID subunit 4B isoform 1
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transcription initiation factor TFIID subunit 4B isoform 1 [Mus musculus]
855 aa protein
accession:NP_001093919.1
transcription initiation factor TFIID subunit 4B
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transcription initiation factor TFIID subunit 4B [Rattus norvegicus]
852 aa protein
accession:NP_001413903.1
TBP-associated factor 4, isoform C
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TBP-associated factor 4, isoform C [Drosophila melanogaster]
851 aa protein
accession:NP_788511.1
DOMAINS: and other(s) domains
...
Transcription initiation factor TFIID subunit 4 [Caenorhabditis elegans]
523 aa protein
accession:NP_490728.2
transcription initiation factor TFIID subunit 4 isoform X1 [Danio rerio]
949 aa protein
accession:XP_005163125.2
transcription initiation factor TFIID subunit 4B isoform 1 [Homo sapiens]
867 aa protein
accession:NP_001280654.1
transcription initiation factor TFIID subunit 4B isoform 1 [Mus musculus]
855 aa protein
accession:NP_001093919.1
transcription initiation factor TFIID subunit 4B [Rattus norvegicus]
852 aa protein
accession:NP_001413903.1
TBP-associated factor 4, isoform C [Drosophila melanogaster]
851 aa protein
accession:NP_788511.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 130 | 130 | 81% | 2e-30 | 27.46% | XP_005163125.2 | |
| 2 | 88.6 | 149 | 47% | 6e-17 | 30.29% | NP_788511.1 | |
| 3 | 86.3 | 148 | 48% | 3e-16 | 30.64% | NP_001280654.1 | |
| 4 | 85.9 | 150 | 45% | 5e-16 | 32.56% | NP_001093919.1 | |
| 5 | 85.1 | 148 | 45% | 7e-16 | 31.79% | NP_001413903.1 |