Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: NP_490974.1 Charged multivesicular body protein 1b [Caenorhabditis elegans] ... Query length: 205 aa

Query: Charged multivesicular body protein 1b ...

Charged multivesicular body protein 1b [Caenorhabditis elegans]

205 aa protein

accession:NP_490974.1

Sequence Identical proteins

charged multivesicular body protein 1, isoform B ...

charged multivesicular body protein 1, isoform B [Drosophila melanogaster]

203 aa protein

accession:NP_001287108.1

Alignment Sequence Identical proteins

charged multivesicular body protein 1b ...

charged multivesicular body protein 1b [Danio rerio]

199 aa protein

accession:NP_956308.1

Alignment Sequence Identical proteins

charged multivesicular body protein 1B2 ...

charged multivesicular body protein 1B2 [Rattus norvegicus]

199 aa protein

accession:NP_001128061.1

Alignment Sequence Identical proteins

charged multivesicular body protein 1b ...

charged multivesicular body protein 1b [Homo sapiens]

199 aa protein

accession:NP_065145.2

Alignment Sequence Identical proteins

charged multivesicular body protein 1B1 ...

charged multivesicular body protein 1B1 [Mus musculus]

199 aa protein

accession:NP_077152.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_001287108.1\|	charged multivesicular body protein 1, isoform B [Drosophila melanogaster]	216	216	96%	2e-70	57.29%	NP_001287108.1
2 Select seq ref\|NP_956308.1\|	charged multivesicular body protein 1b [Danio rerio]	204	204	95%	1e-65	56.12%	NP_956308.1
3 Select seq ref\|NP_001128061.1\|	charged multivesicular body protein 1B2 [Rattus norvegicus]	197	197	95%	5e-63	56.92%	NP_001128061.1
4 Select seq ref\|NP_065145.2\|	charged multivesicular body protein 1b [Homo sapiens]	196	196	95%	9e-63	56.92%	NP_065145.2
5 Select seq ref\|NP_077152.1\|	charged multivesicular body protein 1B1 [Mus musculus]	195	195	95%	3e-62	56.41%	NP_077152.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments