Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: NP_491061.1 Large ribosomal subunit protein uL1 [Caenorhabditis elegans] ... Query length: 216 aa

60S ribosomal protein uL1 ...

60S ribosomal protein uL1 [Schizosaccharomyces pombe]

216 aa protein

accession:NP_587891.1

Alignment Sequence Identical proteins

Query: Large ribosomal subunit protein uL1 ...

Large ribosomal subunit protein uL1 [Caenorhabditis elegans]

216 aa protein

accession:NP_491061.1

Sequence Identical proteins

large ribosomal subunit protein uL1 ...

large ribosomal subunit protein uL1 [Danio rerio]

216 aa protein

accession:NP_955930.1

Alignment Sequence Identical proteins

large ribosomal subunit protein uL1 ...

large ribosomal subunit protein uL1 [Homo sapiens]

217 aa protein

accession:NP_009035.3

Alignment Sequence Identical proteins

large ribosomal subunit protein uL1-like isoform X2 ...

large ribosomal subunit protein uL1-like isoform X2 [Rattus norvegicus]

218 aa protein

accession:XP_038967156.1

Alignment Sequence Identical proteins

ribosomal protein L10Ab, isoform A ...

ribosomal protein L10Ab, isoform A [Drosophila melanogaster]

217 aa protein

accession:NP_648514.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_955930.1\|	large ribosomal subunit protein uL1 [Danio rerio]	303	303	100%	1e-104	72.69%	NP_955930.1
2 Select seq ref\|NP_009035.3\|	large ribosomal subunit protein uL1 [Homo sapiens]	302	302	99%	6e-104	73.02%	NP_009035.3
3 Select seq ref\|XP_038967156.1\|	large ribosomal subunit protein uL1-like isoform X2 [Rattus norvegicus]	298	298	100%	2e-102	70.18%	XP_038967156.1
4 Select seq ref\|NP_648514.1\|	ribosomal protein L10Ab, isoform A [Drosophila melanogaster]	296	296	99%	1e-101	70.23%	NP_648514.1
5 Select seq ref\|NP_587891.1\|	60S ribosomal protein uL1 [Schizosaccharomyces pombe]	280	280	100%	3e-95	66.20%	NP_587891.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments