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Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query: NP_492086.3 Nematode cuticle collagen N-terminal domain-containing protein [Caenorhabditis elegans] ... Query length: 342 aa
collagen alpha-4(VI) chain isoform X1 ...
collagen alpha-4(VI) chain isoform X1 [Mus musculus]
2309 aa protein
accession:XP_036011120.1
collagen alpha-1(X) chain precursor ...
collagen alpha-1(X) chain precursor [Rattus norvegicus]
680 aa protein
accession:NP_037272.1
collagen alpha-1(II) chain isoform X3 ...
collagen alpha-1(II) chain isoform X3 [Danio rerio]
1784 aa protein
accession:XP_021329065.1
collagen alpha-1(XXI) chain isoform X1 ...
collagen alpha-1(XXI) chain isoform X1 [Homo sapiens]
957 aa protein
accession:XP_047275339.1
Query: Nematode cuticle collagen N-terminal domain-containing protein ...
Nematode cuticle collagen N-terminal domain-containing protein [Caenorhabditis elegans]
342 aa protein
accession:NP_492086.3
Cuticle collagen sqt-1 ...
Cuticle collagen sqt-1 [Caenorhabditis elegans]
324 aa protein
accession:NP_001369874.1

Descriptions

Best hits

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Best hits producing significant alignments
Select for downloading or viewing reports Description Max score Total score Query cover E value Ident Accession
1
Cuticle collagen sqt-1 [Caenorhabditis elegans]
118 118 84% 6e-3034.76% NP_001369874.1
2
collagen alpha-4(VI) chain isoform X1 [Mus musculus]
77.4 326 54% 2e-1435.90% XP_036011120.1
3
collagen alpha-1(X) chain precursor [Rattus norvegicus]
73.2 149 53% 3e-1343.00% NP_037272.1
4
collagen alpha-1(II) chain isoform X3 [Danio rerio]
73.2 376 51% 4e-1342.53% XP_021329065.1
5
collagen alpha-1(XXI) chain isoform X1 [Homo sapiens]
69.3 303 50% 6e-1240.00% XP_047275339.1