Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_492423.2
RNA polymerase II subunit A C-terminal domain phosphatase [Caenorhabditis elegans]
...
Query length:
659 aa
DOMAINS: and other(s) domains
...
Query: RNA polymerase II subunit A C-terminal domain phosphatase
...
RNA polymerase II subunit A C-terminal domain phosphatase [Caenorhabditis elegans]
659 aa protein
accession:NP_492423.2
TFIIF-interacting CTD phosphatase, isoform B
...
TFIIF-interacting CTD phosphatase, isoform B [Drosophila melanogaster]
880 aa protein
accession:NP_001286846.1
RNA polymerase II subunit A C-terminal domain phosphatase
...
RNA polymerase II subunit A C-terminal domain phosphatase [Danio rerio]
947 aa protein
accession:NP_001002873.1
RNA polymerase II subunit A C-terminal domain phosphatase isoform 4
...
RNA polymerase II subunit A C-terminal domain phosphatase isoform 4 [Homo sapiens]
867 aa protein
accession:NP_001305440.1
RNA polymerase II subunit A C-terminal domain phosphatase isoform X1
...
RNA polymerase II subunit A C-terminal domain phosphatase isoform X1 [Mus musculus]
842 aa protein
accession:XP_006526588.1
RNA polymerase II subunit A C-terminal domain phosphatase
...
RNA polymerase II subunit A C-terminal domain phosphatase [Rattus norvegicus]
973 aa protein
accession:NP_001401324.1
DOMAINS: and other(s) domains
...
RNA polymerase II subunit A C-terminal domain phosphatase [Caenorhabditis elegans]
659 aa protein
accession:NP_492423.2
TFIIF-interacting CTD phosphatase, isoform B [Drosophila melanogaster]
880 aa protein
accession:NP_001286846.1
RNA polymerase II subunit A C-terminal domain phosphatase [Danio rerio]
947 aa protein
accession:NP_001002873.1
RNA polymerase II subunit A C-terminal domain phosphatase isoform 4 [Homo sapiens]
867 aa protein
accession:NP_001305440.1
RNA polymerase II subunit A C-terminal domain phosphatase isoform X1 [Mus musculus]
842 aa protein
accession:XP_006526588.1
RNA polymerase II subunit A C-terminal domain phosphatase [Rattus norvegicus]
973 aa protein
accession:NP_001401324.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
Select:AllNone
Selected:0
Alignments
Download
GenPept
Graphics
Distance tree of results
Multiple alignment
Show/hide columns of the table presenting best hits
Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 266 | 266 | 43% | 7e-77 | 46.51% | NP_001286846.1 | |
| 2 | 246 | 332 | 55% | 4e-69 | 49.79% | NP_001002873.1 | |
| 3 | 241 | 335 | 55% | 2e-67 | 46.91% | NP_001305440.1 | |
| 4 | 236 | 329 | 56% | 5e-66 | 46.53% | XP_006526588.1 | |
| 5 | 237 | 334 | 60% | 7e-66 | 43.12% | NP_001401324.1 |