Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_494879.2
Nematode cuticle collagen N-terminal domain-containing protein [Caenorhabditis elegans]
...
Query length:
288 aa
DOMAINS: and other(s) domains
...
collagen alpha-3(VI) chain isoform X5
...
collagen alpha-3(VI) chain isoform X5 [Danio rerio]
12627 aa protein
accession:XP_017213295.2
collagen alpha-2(I) chain precursor
...
collagen alpha-2(I) chain precursor [Homo sapiens]
1366 aa protein
accession:NP_000080.2
Query: Nematode cuticle collagen N-terminal domain-containing protein
...
Nematode cuticle collagen N-terminal domain-containing protein [Caenorhabditis elegans]
288 aa protein
accession:NP_494879.2
Nematode cuticle collagen N-terminal domain-containing protein
...
Nematode cuticle collagen N-terminal domain-containing protein [Caenorhabditis elegans]
281 aa protein
accession:NP_503048.1
Nematode cuticle collagen N-terminal domain-containing protein
...
Nematode cuticle collagen N-terminal domain-containing protein [Caenorhabditis elegans]
285 aa protein
accession:NP_494880.1
Nematode cuticle collagen N-terminal domain-containing protein
...
Nematode cuticle collagen N-terminal domain-containing protein [Caenorhabditis elegans]
332 aa protein
accession:NP_001041295.1
DOMAINS: and other(s) domains
...
collagen alpha-3(VI) chain isoform X5 [Danio rerio]
12627 aa protein
accession:XP_017213295.2
collagen alpha-2(I) chain precursor [Homo sapiens]
1366 aa protein
accession:NP_000080.2
Nematode cuticle collagen N-terminal domain-containing protein [Caenorhabditis elegans]
288 aa protein
accession:NP_494879.2
Nematode cuticle collagen N-terminal domain-containing protein [Caenorhabditis elegans]
281 aa protein
accession:NP_503048.1
Nematode cuticle collagen N-terminal domain-containing protein [Caenorhabditis elegans]
285 aa protein
accession:NP_494880.1
Nematode cuticle collagen N-terminal domain-containing protein [Caenorhabditis elegans]
332 aa protein
accession:NP_001041295.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
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Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 286 | 286 | 95% | 2e-95 | 61.96% | NP_503048.1 | |
| 2 | 105 | 354 | 61% | 5e-24 | 33.47% | XP_017213295.2 | |
| 3 | 84.7 | 220 | 62% | 7e-17 | 46.45% | NP_000080.2 | |
| 4 | 258 | 258 | 100% | 1e-84 | 61.81% | NP_494880.1 | |
| 5 | 231 | 231 | 97% | 2e-73 | 56.23% | NP_001041295.1 |