Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_496442.1
putative splicing factor, arginine/serine-rich 1 [Caenorhabditis elegans]
...
Query length:
312 aa
DOMAINS: and other(s) domains
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guard protein for 5'-capping of pre-mRNAs Srp2/Npl3
...
guard protein for 5'-capping of pre-mRNAs Srp2/Npl3 [Schizosaccharomyces pombe]
365 aa protein
accession:NP_594570.1
serine/arginine-rich splicing factor 5 isoform 2
...
serine/arginine-rich splicing factor 5 isoform 2 [Mus musculus]
270 aa protein
accession:NP_001396766.1
serine/arginine-rich splicing factor 5 isoform X2
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serine/arginine-rich splicing factor 5 isoform X2 [Homo sapiens]
239 aa protein
accession:XP_047287639.1
serine/arginine-rich splicing factor RS2Z32 isoform X1
...
serine/arginine-rich splicing factor RS2Z32 isoform X1 [Glycine max]
297 aa protein
accession:XP_040868547.1
Query: putative splicing factor, arginine/serine-rich 1
...
putative splicing factor, arginine/serine-rich 1 [Caenorhabditis elegans]
312 aa protein
accession:NP_496442.1
putative splicing factor, arginine/serine-rich 1
...
putative splicing factor, arginine/serine-rich 1 [Caenorhabditis elegans]
170 aa protein
accession:NP_001379327.1
DOMAINS: and other(s) domains
...
guard protein for 5'-capping of pre-mRNAs Srp2/Npl3 [Schizosaccharomyces pombe]
365 aa protein
accession:NP_594570.1
serine/arginine-rich splicing factor 5 isoform 2 [Mus musculus]
270 aa protein
accession:NP_001396766.1
serine/arginine-rich splicing factor 5 isoform X2 [Homo sapiens]
239 aa protein
accession:XP_047287639.1
serine/arginine-rich splicing factor RS2Z32 isoform X1 [Glycine max]
297 aa protein
accession:XP_040868547.1
putative splicing factor, arginine/serine-rich 1 [Caenorhabditis elegans]
312 aa protein
accession:NP_496442.1
putative splicing factor, arginine/serine-rich 1 [Caenorhabditis elegans]
170 aa protein
accession:NP_001379327.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
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Alignments
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GenPept
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Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 311 | 311 | 54% | 3e-107 | 100.00% | NP_001379327.1 | |
| 2 | 159 | 159 | 63% | 3e-46 | 46.97% | NP_001396766.1 | |
| 3 | 128 | 128 | 74% | 1e-34 | 38.63% | XP_047287639.1 | |
| 4 | 122 | 122 | 64% | 4e-31 | 32.02% | NP_594570.1 | |
| 5 | 84.0 | 84.0 | 27% | 1e-17 | 47.13% | XP_040868547.1 |