Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: NP_497830.1 E3 ubiquitin ligase rnf-5 [Caenorhabditis elegans] ... Query length: 235 aa

suppression of retinal degeneration disease 1 upon overexpression 1, isoform C ...

suppression of retinal degeneration disease 1 upon overexpression 1, isoform C [Drosophila melanogaster]

277 aa protein

accession:NP_573076.1

Alignment Sequence Identical proteins

E3 ubiquitin-protein ligase RNF5 ...

E3 ubiquitin-protein ligase RNF5 [Danio rerio]

205 aa protein

accession:XP_003200552.1

Alignment Sequence Identical proteins

E3 ubiquitin-protein ligase RNF185 isoform 2 ...

E3 ubiquitin-protein ligase RNF185 isoform 2 [Mus musculus]

192 aa protein

accession:NP_001277401.1

Alignment Sequence Identical proteins

E3 ubiquitin-protein ligase RNF185 ...

E3 ubiquitin-protein ligase RNF185 [Rattus norvegicus]

192 aa protein

accession:NP_001019442.1

Alignment Sequence Identical proteins

Query: E3 ubiquitin ligase rnf-5 ...

E3 ubiquitin ligase rnf-5 [Caenorhabditis elegans]

235 aa protein

accession:NP_497830.1

Sequence Identical proteins

RING-type E3 ubiquitin transferase ...

RING-type E3 ubiquitin transferase [Caenorhabditis elegans]

218 aa protein

accession:NP_001309592.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_001309592.1\|	RING-type E3 ubiquitin transferase [Caenorhabditis elegans]	437	437	100%	5e-157	92.77%	NP_001309592.1
2 Select seq ref\|NP_573076.1\|	suppression of retinal degeneration disease 1 upon overexpression 1, isoform C [Drosophila melanogaster]	154	154	98%	7e-45	38.20%	NP_573076.1
3 Select seq ref\|XP_003200552.1\|	E3 ubiquitin-protein ligase RNF5 [Danio rerio]	148	148	62%	4e-43	51.01%	XP_003200552.1
4 Select seq ref\|NP_001277401.1\|	E3 ubiquitin-protein ligase RNF185 isoform 2 [Mus musculus]	146	146	91%	1e-42	40.09%	NP_001277401.1
5 Select seq ref\|NP_001019442.1\|	E3 ubiquitin-protein ligase RNF185 [Rattus norvegicus]	146	146	91%	1e-42	40.28%	NP_001019442.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments