Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_498086.1
Nematode cuticle collagen N-terminal domain-containing protein [Caenorhabditis elegans]
...
Query length:
352 aa
DOMAINS: and other(s) domains
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collagen alpha-1(XXIV) chain isoform 1 precursor
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collagen alpha-1(XXIV) chain isoform 1 precursor [Homo sapiens]
1714 aa protein
accession:NP_690850.2
uncharacterized protein col6a3 isoform X4
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uncharacterized protein col6a3 isoform X4 [Danio rerio]
10897 aa protein
accession:XP_017213298.1
Cuticle collagen sqt-1
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Cuticle collagen sqt-1 [Caenorhabditis elegans]
324 aa protein
accession:NP_001369874.1
Cuticle collagen lon-3
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Cuticle collagen lon-3 [Caenorhabditis elegans]
324 aa protein
accession:NP_506061.1
Query: Nematode cuticle collagen N-terminal domain-containing protein
...
Nematode cuticle collagen N-terminal domain-containing protein [Caenorhabditis elegans]
352 aa protein
accession:NP_498086.1
Nematode cuticle collagen N-terminal domain-containing protein
...
Nematode cuticle collagen N-terminal domain-containing protein [Caenorhabditis elegans]
329 aa protein
accession:NP_495159.2
DOMAINS: and other(s) domains
...
collagen alpha-1(XXIV) chain isoform 1 precursor [Homo sapiens]
1714 aa protein
accession:NP_690850.2
uncharacterized protein col6a3 isoform X4 [Danio rerio]
10897 aa protein
accession:XP_017213298.1
Cuticle collagen sqt-1 [Caenorhabditis elegans]
324 aa protein
accession:NP_001369874.1
Cuticle collagen lon-3 [Caenorhabditis elegans]
324 aa protein
accession:NP_506061.1
Nematode cuticle collagen N-terminal domain-containing protein [Caenorhabditis elegans]
352 aa protein
accession:NP_498086.1
Nematode cuticle collagen N-terminal domain-containing protein [Caenorhabditis elegans]
329 aa protein
accession:NP_495159.2
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
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Alignments
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Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 360 | 360 | 100% | 6e-123 | 60.51% | NP_495159.2 | |
| 2 | 102 | 582 | 75% | 3e-22 | 33.63% | XP_017213298.1 | |
| 3 | 86.7 | 739 | 75% | 4e-17 | 44.62% | NP_690850.2 | |
| 4 | 206 | 206 | 100% | 6e-63 | 41.10% | NP_001369874.1 | |
| 5 | 203 | 203 | 96% | 8e-62 | 41.83% | NP_506061.1 |