Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_500858.2
Nuclear Hormone Receptor family [Caenorhabditis elegans]
...
Query length:
528 aa
DOMAINS: and other(s) domains
...
nuclear receptor subfamily 6 group A member 1-A isoform X1
...
nuclear receptor subfamily 6 group A member 1-A isoform X1 [Danio rerio]
448 aa protein
accession:XP_017212760.1
nuclear receptor subfamily 6 group A member 1 isoform 5
...
nuclear receptor subfamily 6 group A member 1 isoform 5 [Homo sapiens]
479 aa protein
accession:NP_001397925.1
nuclear receptor subfamily 2 group C member 2 isoform 2
...
nuclear receptor subfamily 2 group C member 2 isoform 2 [Mus musculus]
596 aa protein
accession:NP_001397408.1
hepatocyte nuclear factor 4, isoform F
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hepatocyte nuclear factor 4, isoform F [Drosophila melanogaster]
666 aa protein
accession:NP_001285758.1
Query: Nuclear Hormone Receptor family
...
Nuclear Hormone Receptor family [Caenorhabditis elegans]
528 aa protein
accession:NP_500858.2
Nuclear Hormone Receptor family
...
Nuclear Hormone Receptor family [Caenorhabditis elegans]
395 aa protein
accession:NP_001367663.1
DOMAINS: and other(s) domains
...
nuclear receptor subfamily 6 group A member 1-A isoform X1 [Danio rerio]
448 aa protein
accession:XP_017212760.1
nuclear receptor subfamily 6 group A member 1 isoform 5 [Homo sapiens]
479 aa protein
accession:NP_001397925.1
nuclear receptor subfamily 2 group C member 2 isoform 2 [Mus musculus]
596 aa protein
accession:NP_001397408.1
hepatocyte nuclear factor 4, isoform F [Drosophila melanogaster]
666 aa protein
accession:NP_001285758.1
Nuclear Hormone Receptor family [Caenorhabditis elegans]
528 aa protein
accession:NP_500858.2
Nuclear Hormone Receptor family [Caenorhabditis elegans]
395 aa protein
accession:NP_001367663.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 828 | 828 | 74% | 0.0 | 100.00% | NP_001367663.1 | |
| 2 | 96.3 | 96.3 | 78% | 2e-20 | 25.28% | XP_017212760.1 | |
| 3 | 91.7 | 91.7 | 19% | 1e-18 | 44.76% | NP_001397925.1 | |
| 4 | 88.2 | 88.2 | 17% | 2e-17 | 44.68% | NP_001397408.1 | |
| 5 | 85.9 | 85.9 | 20% | 1e-16 | 39.83% | NP_001285758.1 |