Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_504791.3
Mediator of RNA polymerase II transcription subunit 6 [Caenorhabditis elegans]
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Query length:
250 aa
DOMAINS: and other(s) domains
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Query: Mediator of RNA polymerase II transcription subunit 6
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Mediator of RNA polymerase II transcription subunit 6 [Caenorhabditis elegans]
250 aa protein
accession:NP_504791.3
mediator of RNA polymerase II transcription subunit 6
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mediator of RNA polymerase II transcription subunit 6 [Rattus norvegicus]
246 aa protein
accession:NP_001100212.1
mediator of RNA polymerase II transcription subunit 6 isoform 1
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mediator of RNA polymerase II transcription subunit 6 isoform 1 [Mus musculus]
246 aa protein
accession:NP_001334313.1
mediator of RNA polymerase II transcription subunit 6 isoform 2
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mediator of RNA polymerase II transcription subunit 6 isoform 2 [Homo sapiens]
246 aa protein
accession:NP_005457.2
mediator of RNA polymerase II transcription subunit 6
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mediator of RNA polymerase II transcription subunit 6 [Danio rerio]
254 aa protein
accession:NP_001002084.1
mediator complex subunit 6, isoform C
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mediator complex subunit 6, isoform C [Drosophila melanogaster]
249 aa protein
accession:NP_001163577.1
DOMAINS: and other(s) domains
...
Mediator of RNA polymerase II transcription subunit 6 [Caenorhabditis elegans]
250 aa protein
accession:NP_504791.3
mediator of RNA polymerase II transcription subunit 6 [Rattus norvegicus]
246 aa protein
accession:NP_001100212.1
mediator of RNA polymerase II transcription subunit 6 isoform 1 [Mus musculus]
246 aa protein
accession:NP_001334313.1
mediator of RNA polymerase II transcription subunit 6 isoform 2 [Homo sapiens]
246 aa protein
accession:NP_005457.2
mediator of RNA polymerase II transcription subunit 6 [Danio rerio]
254 aa protein
accession:NP_001002084.1
mediator complex subunit 6, isoform C [Drosophila melanogaster]
249 aa protein
accession:NP_001163577.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 144 | 144 | 91% | 8e-41 | 35.37% | NP_001100212.1 | |
| 2 | 143 | 143 | 91% | 2e-40 | 35.77% | NP_001334313.1 | |
| 3 | 140 | 140 | 91% | 1e-39 | 35.37% | NP_005457.2 | |
| 4 | 134 | 134 | 76% | 6e-37 | 36.79% | NP_001002084.1 | |
| 5 | 134 | 134 | 67% | 6e-37 | 39.77% | NP_001163577.1 |