Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: NP_524411.1 rhodopsin 3 [Drosophila melanogaster] ... Query length: 383 aa

melanopsin-A ...

melanopsin-A [Danio rerio]

593 aa protein

accession:NP_001122233.2

Alignment Sequence Identical proteins

melanopsin isoform 2 ...

melanopsin isoform 2 [Mus musculus]

466 aa protein

accession:NP_001122071.1

Alignment Sequence Identical proteins

melanopsin ...

melanopsin [Rattus norvegicus]

474 aa protein

accession:NP_620215.1

Alignment Sequence Identical proteins

melanopsin isoform 1 ...

melanopsin isoform 1 [Homo sapiens]

478 aa protein

accession:NP_150598.1

Alignment Sequence Identical proteins

Query: rhodopsin 3 ...

rhodopsin 3 [Drosophila melanogaster]

383 aa protein

accession:NP_524411.1

Sequence Identical proteins

rhodopsin 4 ...

rhodopsin 4 [Drosophila melanogaster]

378 aa protein

accession:NP_476701.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_476701.1\|	rhodopsin 4 [Drosophila melanogaster]	554	554	91%	0.0	74.15%	NP_476701.1
2 Select seq ref\|NP_001122233.2\|	melanopsin-A [Danio rerio]	191	191	80%	4e-54	33.44%	NP_001122233.2
3 Select seq ref\|NP_001122071.1\|	melanopsin isoform 2 [Mus musculus]	177	177	87%	7e-50	32.07%	NP_001122071.1
4 Select seq ref\|NP_620215.1\|	melanopsin [Rattus norvegicus]	177	177	81%	7e-50	32.92%	NP_620215.1
5 Select seq ref\|NP_150598.1\|	melanopsin isoform 1 [Homo sapiens]	176	176	81%	3e-49	33.65%	NP_150598.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments