Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_542412.2
collagen alpha-2(XI) chain isoform 2 preproprotein [Homo sapiens]
...
Query length:
1650 aa
DOMAINS: and other(s) domains
...
collagen alpha-2(XI) chain isoform 1 precursor
...
collagen alpha-2(XI) chain isoform 1 precursor [Danio rerio]
1695 aa protein
accession:NP_001073461.2
collagen alpha-2(XI) chain isoform X2
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collagen alpha-2(XI) chain isoform X2 [Rattus norvegicus]
1878 aa protein
accession:XP_038954427.2
collagen alpha-2(XI) chain isoform 3 precursor
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collagen alpha-2(XI) chain isoform 3 precursor [Mus musculus]
1736 aa protein
accession:NP_001388230.1
collagen alpha-2(XI) chain isoform 3 preproprotein
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collagen alpha-2(XI) chain isoform 3 preproprotein [Homo sapiens]
1629 aa protein
accession:NP_542410.2
Query: collagen alpha-2(XI) chain isoform 2 preproprotein
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collagen alpha-2(XI) chain isoform 2 preproprotein [Homo sapiens]
1650 aa protein
accession:NP_542412.2
collagen alpha-2(XI) chain isoform 5 preproprotein
...
collagen alpha-2(XI) chain isoform 5 preproprotein [Homo sapiens]
1676 aa protein
accession:NP_001411037.1
DOMAINS: and other(s) domains
...
collagen alpha-2(XI) chain isoform 1 precursor [Danio rerio]
1695 aa protein
accession:NP_001073461.2
collagen alpha-2(XI) chain isoform X2 [Rattus norvegicus]
1878 aa protein
accession:XP_038954427.2
collagen alpha-2(XI) chain isoform 3 precursor [Mus musculus]
1736 aa protein
accession:NP_001388230.1
collagen alpha-2(XI) chain isoform 3 preproprotein [Homo sapiens]
1629 aa protein
accession:NP_542410.2
collagen alpha-2(XI) chain isoform 2 preproprotein [Homo sapiens]
1650 aa protein
accession:NP_542412.2
collagen alpha-2(XI) chain isoform 5 preproprotein [Homo sapiens]
1676 aa protein
accession:NP_001411037.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 2974 | 2974 | 100% | 0.0 | 98.45% | NP_001411037.1 | |
| 2 | 2353 | 2844 | 100% | 0.0 | 95.55% | XP_038954427.2 | |
| 3 | 2092 | 2092 | 100% | 0.0 | 87.29% | NP_001388230.1 | |
| 4 | 1467 | 1467 | 99% | 0.0 | 72.34% | NP_001073461.2 | |
| 5 | 2935 | 2935 | 100% | 0.0 | 98.73% | NP_542410.2 |