Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: NP_571842.1 claudin 3c [Danio rerio] ... Query length: 214 aa

claudin 3d ...

claudin 3d [Danio rerio]

218 aa protein

accession:NP_571839.1

Alignment Sequence Identical proteins

claudin-3-like ...

claudin-3-like [Danio rerio]

215 aa protein

accession:XP_005169738.1

Alignment Sequence Identical proteins

Query: claudin 3c ...

claudin 3c [Danio rerio]

214 aa protein

accession:NP_571842.1

Sequence Identical proteins

claudin-3 ...

claudin-3 [Rattus norvegicus]

219 aa protein

accession:NP_113888.2

Alignment Sequence Identical proteins

claudin-3 ...

claudin-3 [Mus musculus]

219 aa protein

accession:NP_034032.1

Alignment Sequence Identical proteins

claudin-3 ...

claudin-3 [Homo sapiens]

220 aa protein

accession:NP_001297.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|XP_005169738.1\|	claudin-3-like [Danio rerio]	328	328	100%	3e-114	69.77%	XP_005169738.1
2 Select seq ref\|NP_113888.2\|	claudin-3 [Rattus norvegicus]	288	288	100%	2e-98	61.82%	NP_113888.2
3 Select seq ref\|NP_001297.1\|	claudin-3 [Homo sapiens]	280	280	100%	2e-95	63.64%	NP_001297.1
4 Select seq ref\|NP_034032.1\|	claudin-3 [Mus musculus]	273	273	100%	2e-92	61.82%	NP_034032.1
5 Select seq ref\|NP_571839.1\|	claudin 3d [Danio rerio]	289	289	99%	7e-99	62.04%	NP_571839.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments